Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AC087650.1-201ENST00000431445 468 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AC083863.1-201ENST00000438811 231 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AL138799.3-201ENST00000438968 350 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AC007677.1-201ENST00000445757 515 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AC073264.2-201ENST00000448886 166 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 HMGB3P8-201ENST00000449709 577 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AL353691.1-201ENST00000451332 387 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 SNORD108-201ENST00000459332 71 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 RN7SL330P-201ENST00000469709 307 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.28□□□□□ -1.88
ERVFC1-1P60608 HSPD1P15-201ENST00000505573 1122 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 BTF3L4P4-201ENST00000506381 449 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.28□□□□□ -1.88
ERVFC1-1P60608 Y_RNA.701-201ENST00000516812 110 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 SUB1P1-201ENST00000524415 382 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AC098848.2-201ENST00000588023 330 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AC010525.2-201ENST00000590920 195 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AC234771.5-201ENST00000600161 514 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AC004853.1-201ENST00000604902 698 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AL442067.2-201ENST00000614033 363 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AL354950.2-201ENST00000617939 290 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AC092628.2-201ENST00000622492 339 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AC005858.4-201ENST00000623191 700 ntBASIC3.28□□□□□ -1.88
ERVFC1-1P60608 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.28□□□□□ -1.88
ERVFC1-1P60608 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.28□□□□□ -1.88
ERVFC1-1P60608 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.28□□□□□ -1.88
ERVFC1-1P60608 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ERVFC1-1P60608 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ERVFC1-1P60608 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ERVFC1-1P60608 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.28□□□□□ -1.88
ERVFC1-1P60608 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ERVFC1-1P60608 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 OR1S2-201ENST00000302592 978 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 RNU4-79P-201ENST00000362764 141 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 RNU1-18P-201ENST00000363062 164 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 Y_RNA.166-201ENST00000363730 102 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 MIR19A-201ENST00000384878 82 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 ENSAP1-201ENST00000392855 326 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AL136116.1-201ENST00000403591 381 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 RNU2-15P-201ENST00000410692 191 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 RNU6-373P-201ENST00000411247 98 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 FAR2P2-201ENST00000413041 594 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 RPL31P2-201ENST00000413849 377 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 BX510359.2-201ENST00000417920 305 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 FAR2P4-202ENST00000425399 584 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 RPL21P89-201ENST00000444021 467 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 CBWD4P-201ENST00000445695 655 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AC079781.2-201ENST00000446424 169 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 HMGN2P7-201ENST00000456186 273 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 CEACAMP4-201ENST00000457676 421 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 RNU7-63P-201ENST00000459054 62 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 RPS4XP10-201ENST00000465034 731 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 RPS20P21-201ENST00000466859 343 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 EIF4EP3-201ENST00000498782 656 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 Vault.1-201ENST00000516474 102 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 RNU6-410P-201ENST00000517006 107 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 PSMA2P1-201ENST00000526365 646 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 OR4R1P-201ENST00000529879 463 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 HPRT1P3-201ENST00000539521 576 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AC023050.3-201ENST00000541142 333 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AC093027.1-201ENST00000546698 429 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 SETP2-201ENST00000553886 926 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AC068831.4-201ENST00000556118 109 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 GLUD1P4-201ENST00000590914 418 ntBASIC3.27□□□□□ -1.89
ERVFC1-1P60608 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.27□□□□□ -1.89
ERVFC1-1P60608 VN1R80P-201ENST00000597126 338 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms