Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.03□□□□□ -1.76
CLRN1P58418 AC006065.5-201ENST00000623427 349 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.03□□□□□ -1.76
CLRN1P58418 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLRN1P58418 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLRN1P58418 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLRN1P58418 AC012618.3-205ENST00000637896 1496 ntBASIC4.03□□□□□ -1.76
CLRN1P58418 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.03□□□□□ -1.76
CLRN1P58418 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CLRN1P58418 AC090229.1-201ENST00000590983 1609 ntBASIC4.03□□□□□ -1.77
CLRN1P58418 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.77
CLRN1P58418 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CLRN1P58418 AP001350.1-201ENST00000601906 1524 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN1P58418 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN1P58418 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLRN1P58418 AC021146.4-201ENST00000309229 279 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN1P58418 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN1P58418 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLRN1P58418 Y_RNA.387-201ENST00000383918 102 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 AL133270.1-201ENST00000402635 279 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 RPS4XP9-201ENST00000405151 780 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 SNORA11B-201ENST00000408175 129 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 AC009237.10-201ENST00000414112 510 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.02□□□□□ -1.77
CLRN1P58418 USP9YP20-201ENST00000419224 558 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN1P58418 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.02□□□□□ -1.77
CLRN1P58418 AL162591.2-201ENST00000449634 317 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 AC012671.1-201ENST00000451912 203 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 FABP5P13-201ENST00000452144 328 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN1P58418 RPL12P20-201ENST00000475538 479 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN1P58418 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.02□□□□□ -1.77
CLRN1P58418 RNU6-123P-201ENST00000516163 102 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 RNU6-864P-201ENST00000516256 108 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 RNU6-685P-201ENST00000517088 95 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN1P58418 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.02□□□□□ -1.77
CLRN1P58418 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN1P58418 AL121576.1-201ENST00000556055 276 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN1P58418 RPL23AP84-201ENST00000571193 464 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN1P58418 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN1P58418 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.02□□□□□ -1.77
CLRN1P58418 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.02□□□□□ -1.77
CLRN1P58418 MIR3942-201ENST00000585264 109 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.02□□□□□ -1.77
CLRN1P58418 HMGN2P28-201ENST00000606102 262 ntBASIC4.02□□□□□ -1.77
CLRN1P58418 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN1P58418 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CLRN1P58418 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN1P58418 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN1P58418 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN1P58418 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CLRN1P58418 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLRN1P58418 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CLRN1P58418 AC125257.1-201ENST00000560400 2930 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CLRN1P58418 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN1P58418 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CLRN1P58418 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.01□□□□□ -1.77
CLRN1P58418 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN1P58418 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN1P58418 RNU1-20P-201ENST00000363314 162 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.01□□□□□ -1.77
CLRN1P58418 RNU6-1013P-201ENST00000384180 107 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 RNA5SP397-201ENST00000391323 118 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 RPS12P23-201ENST00000419579 400 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 CALM2P2-201ENST00000428512 440 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AC236972.2-201ENST00000434979 310 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AL513533.1-201ENST00000453728 415 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.01□□□□□ -1.77
CLRN1P58418 SCARNA18-201ENST00000459004 134 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 RPL35AP28-201ENST00000459730 331 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AC116533.1-201ENST00000459748 321 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AC010326.1-201ENST00000462726 602 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 IGLV2-34-201ENST00000490007 283 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.01□□□□□ -1.77
CLRN1P58418 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLRN1P58418 RNA5SP497-201ENST00000516081 97 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AC008489.1-201ENST00000524271 483 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AP006587.4-201ENST00000526053 529 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.01□□□□□ -1.77
CLRN1P58418 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.01□□□□□ -1.77
CLRN1P58418 AL121603.1-201ENST00000553815 142 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AL121821.2-201ENST00000556081 394 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CLRN1P58418 BNIP3P5-201ENST00000562290 498 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.01□□□□□ -1.77
CLRN1P58418 RPL7P50-201ENST00000600588 727 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 BPIFA4P-203ENST00000603168 689 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AC008638.3-201ENST00000603341 463 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AL592436.1-201ENST00000605135 558 ntBASIC4.01□□□□□ -1.77
CLRN1P58418 AL670379.4-201ENST00000605279 254 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms