Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC103783.1-201ENST00000520506 373 ntBASIC2.53□□□□□ -2
VSX2P58304 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.53□□□□□ -2
VSX2P58304 AP000857.1-201ENST00000532151 543 ntBASIC2.53□□□□□ -2
VSX2P58304 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.53□□□□□ -2
VSX2P58304 CR383656.7-201ENST00000548164 174 ntBASIC2.53□□□□□ -2
VSX2P58304 AL391156.1-201ENST00000554965 554 ntBASIC2.53□□□□□ -2
VSX2P58304 AC027807.1-201ENST00000559921 996 ntBASIC2.53□□□□□ -2
VSX2P58304 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.53□□□□□ -2
VSX2P58304 AC090079.2-201ENST00000575289 768 ntBASIC2.53□□□□□ -2
VSX2P58304 MIR3912-201ENST00000577566 105 ntBASIC2.53□□□□□ -2
VSX2P58304 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.53□□□□□ -2
VSX2P58304 AL606834.3-201ENST00000602615 496 ntBASIC2.53□□□□□ -2
VSX2P58304 AC093673.2-201ENST00000609674 331 ntBASIC2.53□□□□□ -2
VSX2P58304 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.53□□□□□ -2
VSX2P58304 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
VSX2P58304 AL136360.1-201ENST00000503377 1900 ntBASIC2.52□□□□□ -2.01
VSX2P58304 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.52□□□□□ -2.01
VSX2P58304 AC107982.1-201ENST00000507171 1300 ntBASIC2.52□□□□□ -2.01
VSX2P58304 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VSX2P58304 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VSX2P58304 MIR449A-201ENST00000362113 91 ntBASIC2.52□□□□□ -2.01
VSX2P58304 RNU5D-1-201ENST00000363299 116 ntBASIC2.52□□□□□ -2.01
VSX2P58304 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VSX2P58304 RNU6-224P-201ENST00000384055 107 ntBASIC2.52□□□□□ -2.01
VSX2P58304 RNU6-1257P-201ENST00000384625 110 ntBASIC2.52□□□□□ -2.01
VSX2P58304 MIR506-201ENST00000384998 124 ntBASIC2.52□□□□□ -2.01
VSX2P58304 Y_RNA.578-201ENST00000390903 88 ntBASIC2.52□□□□□ -2.01
VSX2P58304 AC068533.2-201ENST00000411872 306 ntBASIC2.52□□□□□ -2.01
VSX2P58304 MTATP6P19-201ENST00000413797 659 ntBASIC2.52□□□□□ -2.01
VSX2P58304 AL449283.1-202ENST00000418249 604 ntBASIC2.52□□□□□ -2.01
VSX2P58304 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.52□□□□□ -2.01
VSX2P58304 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.52□□□□□ -2.01
VSX2P58304 MTND2P5-201ENST00000432656 1006 ntBASIC2.52□□□□□ -2.01
VSX2P58304 AP000705.1-201ENST00000454567 350 ntBASIC2.52□□□□□ -2.01
VSX2P58304 RPS15AP17-201ENST00000470598 390 ntBASIC2.52□□□□□ -2.01
VSX2P58304 AIG1P1-201ENST00000503376 148 ntBASIC2.52□□□□□ -2.01
VSX2P58304 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.52□□□□□ -2.01
VSX2P58304 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
VSX2P58304 AC004486.1-201ENST00000546846 233 ntBASIC2.52□□□□□ -2.01
VSX2P58304 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.52□□□□□ -2.01
VSX2P58304 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.52□□□□□ -2.01
VSX2P58304 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.52□□□□□ -2.01
VSX2P58304 AL035411.2-201ENST00000604022 421 ntBASIC2.52□□□□□ -2.01
VSX2P58304 AC012443.1-201ENST00000605605 231 ntBASIC2.52□□□□□ -2.01
VSX2P58304 AC092608.2-201ENST00000624427 218 ntBASIC2.52□□□□□ -2.01
VSX2P58304 AC138915.1-201ENST00000565427 1685 ntBASIC2.52□□□□□ -2.01
VSX2P58304 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VSX2P58304 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
VSX2P58304 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.52□□□□□ -2.01
VSX2P58304 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
VSX2P58304 OR4G11P-202ENST00000642116 1414 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AP000526.1-201ENST00000603308 1388 ntBASIC2.51□□□□□ -2.01
VSX2P58304 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
VSX2P58304 RNA5SP252-201ENST00000391131 119 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AL031679.1-201ENST00000400616 525 ntBASIC2.51□□□□□ -2.01
VSX2P58304 RNA5SP80-201ENST00000410475 111 ntBASIC2.51□□□□□ -2.01
VSX2P58304 HMGN2P35-201ENST00000412164 270 ntBASIC2.51□□□□□ -2.01
VSX2P58304 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.51□□□□□ -2.01
VSX2P58304 AL592310.1-201ENST00000414330 671 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.51□□□□□ -2.01
VSX2P58304 RPL21P32-201ENST00000419877 477 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.51□□□□□ -2.01
VSX2P58304 GTF2IP3-201ENST00000433887 494 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AC004866.2-201ENST00000438285 481 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.51□□□□□ -2.01
VSX2P58304 MTCYBP11-201ENST00000447254 1109 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AC026410.2-201ENST00000460281 156 ntBASIC2.51□□□□□ -2.01
VSX2P58304 RPL31P60-201ENST00000478450 367 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AC104982.1-201ENST00000478775 574 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AC103975.1-201ENST00000482506 483 ntBASIC2.51□□□□□ -2.01
VSX2P58304 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.51□□□□□ -2.01
VSX2P58304 AC090453.1-201ENST00000495560 436 ntBASIC2.51□□□□□ -2.01
VSX2P58304 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.51□□□□□ -2.01
VSX2P58304 AC009901.1-201ENST00000506703 541 ntBASIC2.51□□□□□ -2.01
VSX2P58304 HMGB1P28-201ENST00000507778 552 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AC093677.1-201ENST00000514414 678 ntBASIC2.51□□□□□ -2.01
VSX2P58304 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VSX2P58304 AC100870.1-201ENST00000522035 505 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.51□□□□□ -2.01
VSX2P58304 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
VSX2P58304 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VSX2P58304 NBEAP1-201ENST00000554452 979 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.51□□□□□ -2.01
VSX2P58304 MTND3P13-201ENST00000574391 343 ntBASIC2.51□□□□□ -2.01
VSX2P58304 MIR4637-201ENST00000582405 84 ntBASIC2.51□□□□□ -2.01
VSX2P58304 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.51□□□□□ -2.01
VSX2P58304 AL022067.1-201ENST00000602426 454 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AC009220.3-201ENST00000604318 586 ntBASIC2.51□□□□□ -2.01
VSX2P58304 HSPE1P7-201ENST00000604681 321 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AL133507.1-201ENST00000605269 557 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AC023158.2-201ENST00000614876 543 ntBASIC2.51□□□□□ -2.01
VSX2P58304 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
VSX2P58304 AC002064.3-201ENST00000623448 346 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AC104985.3-201ENST00000623479 597 ntBASIC2.51□□□□□ -2.01
VSX2P58304 AL138960.2-201ENST00000625145 535 ntBASIC2.51□□□□□ -2.01
VSX2P58304 MIR1322-201ENST00000638013 71 ntBASIC2.51□□□□□ -2.01
VSX2P58304 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VSX2P58304 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VSX2P58304 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
VSX2P58304 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms