Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 FAM27D1-201ENST00000612308 341 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 YWHAEP7-203ENST00000622054 312 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 MIR7641-1-201ENST00000627518 61 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 U6.114-201ENST00000636407 96 ntBASIC3.92□□□□□ -1.78
SUMO3P55854 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.92□□□□□ -1.78
SUMO3P55854 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.92□□□□□ -1.78
SUMO3P55854 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.92□□□□□ -1.78
SUMO3P55854 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SUMO3P55854 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.92□□□□□ -1.78
SUMO3P55854 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SUMO3P55854 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SUMO3P55854 OR4G2P-202ENST00000641004 1759 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SUMO3P55854 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SUMO3P55854 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SUMO3P55854 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
SUMO3P55854 RNU1-108P-201ENST00000362556 161 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 Y_RNA.38-201ENST00000362617 102 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 RNA5SP502-201ENST00000362694 119 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SUMO3P55854 RNU6-14P-201ENST00000384630 106 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 SNORD66.1-201ENST00000391230 76 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SUMO3P55854 RNA5SP129-201ENST00000410276 118 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 RNA5SP146-201ENST00000410743 123 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 AL161631.1-201ENST00000417933 486 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 SNRPEP10-201ENST00000420249 274 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.91□□□□□ -1.78
SUMO3P55854 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.91□□□□□ -1.78
SUMO3P55854 AL157831.1-201ENST00000426134 473 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.91□□□□□ -1.78
SUMO3P55854 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.91□□□□□ -1.78
SUMO3P55854 CALM1P1-201ENST00000442082 433 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.91□□□□□ -1.78
SUMO3P55854 AC073587.1-201ENST00000447093 876 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 WASF1P1-201ENST00000447560 1131 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 AC114755.5-201ENST00000447760 831 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.91□□□□□ -1.78
SUMO3P55854 NFU1P2-201ENST00000448700 469 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.91□□□□□ -1.78
SUMO3P55854 RN7SL303P-201ENST00000469773 251 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 RPL7L1P8-201ENST00000469911 741 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 AC116353.2-201ENST00000505332 712 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 AC108078.2-201ENST00000510750 236 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.91□□□□□ -1.78
SUMO3P55854 RNU6-927P-201ENST00000516199 100 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 RNA5SP73-201ENST00000516744 108 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 RN7SKP60-201ENST00000516985 239 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 IGKV2D-19-201ENST00000523346 262 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 OR5B19P-201ENST00000531766 928 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.91□□□□□ -1.78
SUMO3P55854 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.91□□□□□ -1.78
SUMO3P55854 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.91□□□□□ -1.78
SUMO3P55854 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.91□□□□□ -1.78
SUMO3P55854 MIR7154-201ENST00000620673 73 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.91□□□□□ -1.78
SUMO3P55854 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SUMO3P55854 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SUMO3P55854 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.91□□□□□ -1.78
SUMO3P55854 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.91□□□□□ -1.78
SUMO3P55854 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SUMO3P55854 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.9□□□□□ -1.78
SUMO3P55854 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
SUMO3P55854 AC004972.1-201ENST00000623934 2209 ntBASIC3.9□□□□□ -1.78
SUMO3P55854 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SUMO3P55854 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SUMO3P55854 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
SUMO3P55854 RNY3P3-201ENST00000363816 102 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 SNORD115-7-201ENST00000365306 82 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.9□□□□□ -1.79
SUMO3P55854 RNU6-817P-201ENST00000391083 104 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 RNU2-29P-201ENST00000410423 189 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 AC011933.1-201ENST00000413334 321 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 USP9YP6-201ENST00000413550 854 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.9□□□□□ -1.79
SUMO3P55854 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.9□□□□□ -1.79
SUMO3P55854 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.9□□□□□ -1.79
SUMO3P55854 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.9□□□□□ -1.79
SUMO3P55854 GTF2IP20-201ENST00000431663 360 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.9□□□□□ -1.79
SUMO3P55854 MTCO3P18-201ENST00000440206 761 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.9□□□□□ -1.79
SUMO3P55854 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.9□□□□□ -1.79
SUMO3P55854 MTND1P18-201ENST00000448191 573 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 CACYBPP2-201ENST00000453625 678 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.9□□□□□ -1.79
SUMO3P55854 RNU6-953P-201ENST00000459154 107 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 AC116533.1-201ENST00000459748 321 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 AC011276.1-201ENST00000469688 323 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 AC006463.2-201ENST00000473326 348 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 AC233702.1-201ENST00000482905 502 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
SUMO3P55854 PCBP2P3-201ENST00000509726 843 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.9□□□□□ -1.79
SUMO3P55854 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.9□□□□□ -1.79
SUMO3P55854 RNA5SP503-201ENST00000517047 117 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 RN7SKP289-201ENST00000517244 295 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.9□□□□□ -1.79
SUMO3P55854 AC134698.4-201ENST00000523451 826 ntBASIC3.9□□□□□ -1.79
SUMO3P55854 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms