Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RPL21P134-201ENST00000453468 483 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 UBE2V1P12-201ENST00000503954 474 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 AC022483.1-201ENST00000514020 567 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.71□□□□□ -1.98
PKNOX1P55347 RNU6-528P-201ENST00000516926 100 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PKNOX1P55347 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.71□□□□□ -1.98
PKNOX1P55347 AC090615.1-201ENST00000577519 154 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 MIR4429-201ENST00000580105 73 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.71□□□□□ -1.98
PKNOX1P55347 AC105224.1-201ENST00000587055 421 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.71□□□□□ -1.98
PKNOX1P55347 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.71□□□□□ -1.98
PKNOX1P55347 AP000254.1-201ENST00000609934 520 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 AL590099.1-201ENST00000615276 138 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 AL450472.3-201ENST00000615578 367 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 CR381653.2-201ENST00000624041 768 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 MIR3651-201ENST00000630427 90 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PKNOX1P55347 AL390862.1-201ENST00000635467 1469 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 AP003122.5-201ENST00000527668 3766 ntBASIC2.71□□□□□ -1.98
PKNOX1P55347 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
PKNOX1P55347 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PKNOX1P55347 RNU6-799P-201ENST00000363567 107 ntBASIC2.7□□□□□ -1.98
PKNOX1P55347 RNU4-68P-201ENST00000364314 141 ntBASIC2.7□□□□□ -1.98
PKNOX1P55347 Y_RNA.311-201ENST00000365068 96 ntBASIC2.7□□□□□ -1.98
PKNOX1P55347 MTCO2P23-201ENST00000425216 680 ntBASIC2.7□□□□□ -1.98
PKNOX1P55347 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.7□□□□□ -1.98
PKNOX1P55347 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.7□□□□□ -1.98
PKNOX1P55347 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.7□□□□□ -1.98
PKNOX1P55347 AC002381.1-201ENST00000447049 280 ntBASIC2.7□□□□□ -1.98
PKNOX1P55347 MTND1P16-201ENST00000465177 898 ntBASIC2.7□□□□□ -1.98
PKNOX1P55347 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.7□□□□□ -1.98
PKNOX1P55347 SETP11-201ENST00000473027 690 ntBASIC2.7□□□□□ -1.98
PKNOX1P55347 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.7□□□□□ -1.98
PKNOX1P55347 SNORA31.22-201ENST00000517204 135 ntBASIC2.7□□□□□ -1.98
PKNOX1P55347 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.7□□□□□ -1.98
PKNOX1P55347 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.7□□□□□ -1.98
PKNOX1P55347 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.7□□□□□ -1.98
PKNOX1P55347 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PKNOX1P55347 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.7□□□□□ -1.98
PKNOX1P55347 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.7□□□□□ -1.98
PKNOX1P55347 AC012493.2-201ENST00000595083 291 ntBASIC2.7□□□□□ -1.98
PKNOX1P55347 AC024153.1-201ENST00000603103 365 ntBASIC2.7□□□□□ -1.98
PKNOX1P55347 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.7□□□□□ -1.98
PKNOX1P55347 AP002826.1-201ENST00000608835 315 ntBASIC2.7□□□□□ -1.98
PKNOX1P55347 AC109809.1-201ENST00000619665 545 ntBASIC2.7□□□□□ -1.98
PKNOX1P55347 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.7□□□□□ -1.98
PKNOX1P55347 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PKNOX1P55347 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.7□□□□□ -1.98
PKNOX1P55347 AC087359.1-201ENST00000508335 1740 ntBASIC2.7□□□□□ -1.98
PKNOX1P55347 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
PKNOX1P55347 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
PKNOX1P55347 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
PKNOX1P55347 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.69□□□□□ -1.98
PKNOX1P55347 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 ZNF29P-201ENST00000225587 168 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 SNORD56.5-201ENST00000364281 72 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 CD24P4-201ENST00000382840 243 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 RNU1-109P-201ENST00000383960 147 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 RNU6-1027P-201ENST00000383998 107 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 Y_RNA.465-201ENST00000384293 102 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 RNU6-925P-201ENST00000384629 104 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 MIR1284-201ENST00000408337 120 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.69□□□□□ -1.98
PKNOX1P55347 AL953862.1-201ENST00000423016 168 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.69□□□□□ -1.98
PKNOX1P55347 NANOGP5-201ENST00000424456 877 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.69□□□□□ -1.98
PKNOX1P55347 AC092648.1-201ENST00000425870 423 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 AC090774.1-201ENST00000435925 246 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 AC004854.1-201ENST00000440356 349 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 MTND5P14-201ENST00000441481 1267 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 UBBP3-201ENST00000445497 241 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.69□□□□□ -1.98
PKNOX1P55347 Z96811.1-201ENST00000445880 108 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 AL009048.1-201ENST00000450437 298 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.69□□□□□ -1.98
PKNOX1P55347 AC008571.1-201ENST00000467232 300 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 RPL31P60-201ENST00000478450 367 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.69□□□□□ -1.98
PKNOX1P55347 AC116353.3-201ENST00000511215 249 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 AC091826.1-201ENST00000514065 313 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 RNU6-150P-201ENST00000516237 95 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 RNU6-714P-201ENST00000516963 103 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 COX6CP8-201ENST00000522620 226 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 AP000787.2-201ENST00000604432 568 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 HSPE1P7-201ENST00000604681 321 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 AC008277.2-201ENST00000605196 797 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PKNOX1P55347 AC006386.1-201ENST00000619436 415 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 AC002550.2-201ENST00000621246 394 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 AC011330.2-201ENST00000621680 635 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 AC103798.2-201ENST00000624292 632 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.69□□□□□ -1.98
PKNOX1P55347 AC006378.2-201ENST00000623178 2476 ntBASIC2.69□□□□□ -1.98
PKNOX1P55347 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PKNOX1P55347 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PKNOX1P55347 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PKNOX1P55347 AC012321.1-201ENST00000561622 1588 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms