Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC055876.5-201ENST00000605667 259 ntBASIC4.05□□□□□ -1.76
COPB1P53618 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.05□□□□□ -1.76
COPB1P53618 AC002553.4-201ENST00000616896 331 ntBASIC4.05□□□□□ -1.76
COPB1P53618 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
COPB1P53618 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.05□□□□□ -1.76
COPB1P53618 AC099654.14-201ENST00000638599 341 ntBASIC4.05□□□□□ -1.76
COPB1P53618 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COPB1P53618 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.05□□□□□ -1.76
COPB1P53618 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.05□□□□□ -1.76
COPB1P53618 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COPB1P53618 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.05□□□□□ -1.76
COPB1P53618 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
COPB1P53618 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COPB1P53618 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
COPB1P53618 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COPB1P53618 AL136964.1-201ENST00000622038 2990 ntBASIC4.04□□□□□ -1.76
COPB1P53618 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
COPB1P53618 AC007685.1-201ENST00000329806 452 ntBASIC4.04□□□□□ -1.76
COPB1P53618 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
COPB1P53618 RNA5SP42-201ENST00000364278 115 ntBASIC4.04□□□□□ -1.76
COPB1P53618 RNA5SP283-201ENST00000365604 119 ntBASIC4.04□□□□□ -1.76
COPB1P53618 Y_RNA.402-201ENST00000383972 102 ntBASIC4.04□□□□□ -1.76
COPB1P53618 Y_RNA.453-201ENST00000384223 109 ntBASIC4.04□□□□□ -1.76
COPB1P53618 RPL32P23-201ENST00000397237 405 ntBASIC4.04□□□□□ -1.76
COPB1P53618 FGF7P8-201ENST00000402994 292 ntBASIC4.04□□□□□ -1.76
COPB1P53618 RNU2-15P-201ENST00000410692 191 ntBASIC4.04□□□□□ -1.76
COPB1P53618 AC092832.1-201ENST00000422934 400 ntBASIC4.04□□□□□ -1.76
COPB1P53618 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.04□□□□□ -1.76
COPB1P53618 AC008065.1-201ENST00000428525 348 ntBASIC4.04□□□□□ -1.76
COPB1P53618 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.04□□□□□ -1.76
COPB1P53618 AC002486.1-201ENST00000435098 391 ntBASIC4.04□□□□□ -1.76
COPB1P53618 HMGB1P31-201ENST00000437242 427 ntBASIC4.04□□□□□ -1.76
COPB1P53618 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.04□□□□□ -1.76
COPB1P53618 NFU1P2-201ENST00000448700 469 ntBASIC4.04□□□□□ -1.76
COPB1P53618 MTND1P12-201ENST00000455231 147 ntBASIC4.04□□□□□ -1.76
COPB1P53618 AC055855.1-201ENST00000489563 579 ntBASIC4.04□□□□□ -1.76
COPB1P53618 AC010493.1-201ENST00000513479 292 ntBASIC4.04□□□□□ -1.76
COPB1P53618 Vault.3-201ENST00000516676 95 ntBASIC4.04□□□□□ -1.76
COPB1P53618 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.04□□□□□ -1.76
COPB1P53618 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.04□□□□□ -1.76
COPB1P53618 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COPB1P53618 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.04□□□□□ -1.76
COPB1P53618 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.04□□□□□ -1.76
COPB1P53618 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.04□□□□□ -1.76
COPB1P53618 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.04□□□□□ -1.76
COPB1P53618 AC004853.1-201ENST00000604902 698 ntBASIC4.04□□□□□ -1.76
COPB1P53618 AC008277.2-201ENST00000605196 797 ntBASIC4.04□□□□□ -1.76
COPB1P53618 AC006133.1-201ENST00000617106 264 ntBASIC4.04□□□□□ -1.76
COPB1P53618 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
COPB1P53618 DUXAP9-208ENST00000622815 614 ntBASIC4.04□□□□□ -1.76
COPB1P53618 FP236240.3-201ENST00000623061 327 ntBASIC4.04□□□□□ -1.76
COPB1P53618 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.04□□□□□ -1.76
COPB1P53618 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.04□□□□□ -1.76
COPB1P53618 CR848007.1-201ENST00000442354 1699 ntBASIC4.03□□□□□ -1.76
COPB1P53618 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COPB1P53618 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COPB1P53618 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COPB1P53618 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COPB1P53618 MIR372-201ENST00000362225 67 ntBASIC4.03□□□□□ -1.76
COPB1P53618 RNU6-97P-201ENST00000363387 104 ntBASIC4.03□□□□□ -1.76
COPB1P53618 Y_RNA.159-201ENST00000363674 87 ntBASIC4.03□□□□□ -1.76
COPB1P53618 RNU6-1090P-201ENST00000364065 94 ntBASIC4.03□□□□□ -1.76
COPB1P53618 Y_RNA.409-201ENST00000383990 98 ntBASIC4.03□□□□□ -1.76
COPB1P53618 MIR670-201ENST00000390142 98 ntBASIC4.03□□□□□ -1.76
COPB1P53618 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.03□□□□□ -1.76
COPB1P53618 MRPL42P2-201ENST00000403169 426 ntBASIC4.03□□□□□ -1.76
COPB1P53618 SNORA3.3-201ENST00000408712 125 ntBASIC4.03□□□□□ -1.76
COPB1P53618 RNU6ATAC-201ENST00000408749 126 ntBASIC4.03□□□□□ -1.76
COPB1P53618 SNORA57.3-201ENST00000411095 141 ntBASIC4.03□□□□□ -1.76
COPB1P53618 AC127391.1-201ENST00000411737 98 ntBASIC4.03□□□□□ -1.76
COPB1P53618 FCF1P1-201ENST00000432690 571 ntBASIC4.03□□□□□ -1.76
COPB1P53618 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.03□□□□□ -1.76
COPB1P53618 MTCO3P18-201ENST00000440206 761 ntBASIC4.03□□□□□ -1.76
COPB1P53618 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COPB1P53618 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.03□□□□□ -1.76
COPB1P53618 RPS4XP10-201ENST00000465034 731 ntBASIC4.03□□□□□ -1.76
COPB1P53618 AC021382.1-201ENST00000483523 359 ntBASIC4.03□□□□□ -1.76
COPB1P53618 AC007182.2-201ENST00000489251 402 ntBASIC4.03□□□□□ -1.76
COPB1P53618 AC106872.2-201ENST00000494303 480 ntBASIC4.03□□□□□ -1.76
COPB1P53618 RN7SL323P-201ENST00000494712 295 ntBASIC4.03□□□□□ -1.76
COPB1P53618 AC069439.1-201ENST00000494739 167 ntBASIC4.03□□□□□ -1.76
COPB1P53618 AC010587.1-201ENST00000505809 469 ntBASIC4.03□□□□□ -1.76
COPB1P53618 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
COPB1P53618 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
COPB1P53618 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.03□□□□□ -1.76
COPB1P53618 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.03□□□□□ -1.76
COPB1P53618 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.03□□□□□ -1.76
COPB1P53618 AL157687.1-201ENST00000554853 619 ntBASIC4.03□□□□□ -1.76
COPB1P53618 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.03□□□□□ -1.76
COPB1P53618 AC121334.2-201ENST00000605387 271 ntBASIC4.03□□□□□ -1.76
COPB1P53618 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.03□□□□□ -1.76
COPB1P53618 AL161734.1-201ENST00000609720 557 ntBASIC4.03□□□□□ -1.76
COPB1P53618 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COPB1P53618 AL133173.2-201ENST00000614270 90 ntBASIC4.03□□□□□ -1.76
COPB1P53618 LRRC77P-213ENST00000637727 880 ntBASIC4.03□□□□□ -1.76
COPB1P53618 AL732372.2-225ENST00000642124 456 ntBASIC4.03□□□□□ -1.76
COPB1P53618 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COPB1P53618 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.03□□□□□ -1.76
COPB1P53618 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.03□□□□□ -1.76
COPB1P53618 AC009902.3-201ENST00000606235 2172 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms