Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MTND4LP18-201ENST00000526864 291 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AC109635.4-202ENST00000531666 412 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.32□□□□□ -1.88
PDX1P52945 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.32□□□□□ -1.88
PDX1P52945 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.32□□□□□ -1.88
PDX1P52945 AC060771.1-201ENST00000582031 164 ntBASIC3.32□□□□□ -1.88
PDX1P52945 MIR4325-201ENST00000583049 90 ntBASIC3.32□□□□□ -1.88
PDX1P52945 RSL24D1P11-201ENST00000591045 491 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AC006254.3-201ENST00000603353 884 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AL137843.1-201ENST00000605078 385 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AC025594.3-201ENST00000613068 790 ntBASIC3.32□□□□□ -1.88
PDX1P52945 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.32□□□□□ -1.88
PDX1P52945 AC092628.2-201ENST00000622492 339 ntBASIC3.32□□□□□ -1.88
PDX1P52945 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDX1P52945 MTND4P4-201ENST00000439033 1366 ntBASIC3.32□□□□□ -1.88
PDX1P52945 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDX1P52945 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.32□□□□□ -1.88
PDX1P52945 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDX1P52945 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDX1P52945 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.32□□□□□ -1.88
PDX1P52945 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PDX1P52945 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.31□□□□□ -1.88
PDX1P52945 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDX1P52945 USP8P1-201ENST00000494673 3183 ntBASIC3.31□□□□□ -1.88
PDX1P52945 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PDX1P52945 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDX1P52945 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDX1P52945 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDX1P52945 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PDX1P52945 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PDX1P52945 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PDX1P52945 Y_RNA.46-201ENST00000362695 102 ntBASIC3.31□□□□□ -1.88
PDX1P52945 Y_RNA.51-201ENST00000362725 102 ntBASIC3.31□□□□□ -1.88
PDX1P52945 RNU5E-5P-201ENST00000365379 116 ntBASIC3.31□□□□□ -1.88
PDX1P52945 MIR607-201ENST00000385241 96 ntBASIC3.31□□□□□ -1.88
PDX1P52945 AL136116.1-201ENST00000403591 381 ntBASIC3.31□□□□□ -1.88
PDX1P52945 CCNG1P1-201ENST00000406783 885 ntBASIC3.31□□□□□ -1.88
PDX1P52945 RPS3AP24-201ENST00000407896 734 ntBASIC3.31□□□□□ -1.88
PDX1P52945 U3.39-201ENST00000408569 239 ntBASIC3.31□□□□□ -1.88
PDX1P52945 AC016907.1-201ENST00000419483 435 ntBASIC3.31□□□□□ -1.88
PDX1P52945 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.31□□□□□ -1.88
PDX1P52945 AL356583.2-201ENST00000426536 280 ntBASIC3.31□□□□□ -1.88
PDX1P52945 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.31□□□□□ -1.88
PDX1P52945 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.31□□□□□ -1.88
PDX1P52945 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.31□□□□□ -1.88
PDX1P52945 HMGB3P8-201ENST00000449709 577 ntBASIC3.31□□□□□ -1.88
PDX1P52945 RN7SL594P-201ENST00000470590 287 ntBASIC3.31□□□□□ -1.88
PDX1P52945 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.31□□□□□ -1.88
PDX1P52945 RPL7P23-201ENST00000493874 747 ntBASIC3.31□□□□□ -1.88
PDX1P52945 NIPA2P2-201ENST00000496376 1083 ntBASIC3.31□□□□□ -1.88
PDX1P52945 FCF1P3-201ENST00000496394 590 ntBASIC3.31□□□□□ -1.88
PDX1P52945 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.31□□□□□ -1.88
PDX1P52945 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.31□□□□□ -1.88
PDX1P52945 AC021146.1-201ENST00000511202 716 ntBASIC3.31□□□□□ -1.88
PDX1P52945 RNU6-1073P-201ENST00000517182 106 ntBASIC3.31□□□□□ -1.88
PDX1P52945 RPL12P22-201ENST00000519073 490 ntBASIC3.31□□□□□ -1.88
PDX1P52945 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.31□□□□□ -1.88
PDX1P52945 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.31□□□□□ -1.88
PDX1P52945 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.31□□□□□ -1.88
PDX1P52945 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PDX1P52945 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.31□□□□□ -1.88
PDX1P52945 MIR5680-201ENST00000577577 84 ntBASIC3.31□□□□□ -1.88
PDX1P52945 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.31□□□□□ -1.88
PDX1P52945 AC011451.2-201ENST00000604303 598 ntBASIC3.31□□□□□ -1.88
PDX1P52945 AC108747.1-201ENST00000609508 535 ntBASIC3.31□□□□□ -1.88
PDX1P52945 TUG1_1.1-201ENST00000610654 145 ntBASIC3.31□□□□□ -1.88
PDX1P52945 AC008121.2-201ENST00000614647 523 ntBASIC3.31□□□□□ -1.88
PDX1P52945 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.31□□□□□ -1.88
PDX1P52945 AC025048.6-202ENST00000627667 438 ntBASIC3.31□□□□□ -1.88
PDX1P52945 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.31□□□□□ -1.88
PDX1P52945 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PDX1P52945 AC009902.3-201ENST00000606235 2172 ntBASIC3.31□□□□□ -1.88
PDX1P52945 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PDX1P52945 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PDX1P52945 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.3□□□□□ -1.88
PDX1P52945 AC004925.1-201ENST00000624256 2706 ntBASIC3.3□□□□□ -1.88
PDX1P52945 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.3□□□□□ -1.88
PDX1P52945 AL390237.1-201ENST00000404226 1415 ntBASIC3.3□□□□□ -1.88
PDX1P52945 AC021755.1-201ENST00000559747 1447 ntBASIC3.3□□□□□ -1.88
PDX1P52945 AC068647.1-201ENST00000489539 2265 ntBASIC3.3□□□□□ -1.88
PDX1P52945 GNG5P1-201ENST00000255500 204 ntBASIC3.3□□□□□ -1.88
PDX1P52945 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDX1P52945 RNU6-882P-201ENST00000391025 103 ntBASIC3.3□□□□□ -1.88
PDX1P52945 RPL7P25-201ENST00000404151 721 ntBASIC3.3□□□□□ -1.88
PDX1P52945 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDX1P52945 RPS7P13-201ENST00000413955 498 ntBASIC3.3□□□□□ -1.88
PDX1P52945 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.3□□□□□ -1.88
PDX1P52945 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.3□□□□□ -1.88
PDX1P52945 BEND7P1-201ENST00000422058 457 ntBASIC3.3□□□□□ -1.88
PDX1P52945 VN1R108P-201ENST00000431580 830 ntBASIC3.3□□□□□ -1.88
PDX1P52945 RPL21P112-201ENST00000434403 463 ntBASIC3.3□□□□□ -1.88
PDX1P52945 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.3□□□□□ -1.88
PDX1P52945 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.3□□□□□ -1.88
PDX1P52945 COX6CP2-201ENST00000444980 225 ntBASIC3.3□□□□□ -1.88
PDX1P52945 TPT1P14-201ENST00000448018 505 ntBASIC3.3□□□□□ -1.88
PDX1P52945 AL590365.1-201ENST00000450788 243 ntBASIC3.3□□□□□ -1.88
PDX1P52945 HMGN2P7-201ENST00000456186 273 ntBASIC3.3□□□□□ -1.88
PDX1P52945 TMED11P-201ENST00000479478 690 ntBASIC3.3□□□□□ -1.88
PDX1P52945 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.3□□□□□ -1.88
PDX1P52945 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms