Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNA5SP184-201ENST00000411071 108 ntBASIC1.91□□□□□ -2.1
GTF2A1P52655 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.91□□□□□ -2.1
GTF2A1P52655 HMGB3P31-201ENST00000413333 595 ntBASIC1.91□□□□□ -2.1
GTF2A1P52655 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.91□□□□□ -2.1
GTF2A1P52655 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.91□□□□□ -2.1
GTF2A1P52655 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.91□□□□□ -2.1
GTF2A1P52655 AL118520.1-201ENST00000450770 291 ntBASIC1.91□□□□□ -2.1
GTF2A1P52655 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.91□□□□□ -2.1
GTF2A1P52655 MTCO1P42-201ENST00000457379 726 ntBASIC1.91□□□□□ -2.1
GTF2A1P52655 OR52A4P-202ENST00000481634 799 ntBASIC1.91□□□□□ -2.1
GTF2A1P52655 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.91□□□□□ -2.1
GTF2A1P52655 RN7SL432P-201ENST00000484057 298 ntBASIC1.91□□□□□ -2.1
GTF2A1P52655 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
GTF2A1P52655 OR52A4P-203ENST00000498233 1014 ntBASIC1.91□□□□□ -2.1
GTF2A1P52655 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.91□□□□□ -2.1
GTF2A1P52655 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.91□□□□□ -2.1
GTF2A1P52655 RNU4-29P-201ENST00000515943 174 ntBASIC1.91□□□□□ -2.1
GTF2A1P52655 RNA5SP356-201ENST00000515972 94 ntBASIC1.91□□□□□ -2.1
GTF2A1P52655 RNA5SP24-201ENST00000516478 95 ntBASIC1.91□□□□□ -2.1
GTF2A1P52655 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.91□□□□□ -2.1
GTF2A1P52655 AL513477.2-201ENST00000607858 568 ntBASIC1.91□□□□□ -2.1
GTF2A1P52655 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
GTF2A1P52655 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.91□□□□□ -2.1
GTF2A1P52655 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.91□□□□□ -2.1
GTF2A1P52655 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.91□□□□□ -2.1
GTF2A1P52655 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
GTF2A1P52655 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.9□□□□□ -2.1
GTF2A1P52655 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.9□□□□□ -2.11
GTF2A1P52655 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.9□□□□□ -2.11
GTF2A1P52655 RNU6-821P-201ENST00000390995 107 ntBASIC1.9□□□□□ -2.11
GTF2A1P52655 PTGES3P2-201ENST00000407942 482 ntBASIC1.9□□□□□ -2.11
GTF2A1P52655 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.9□□□□□ -2.11
GTF2A1P52655 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.9□□□□□ -2.11
GTF2A1P52655 AC233982.1-201ENST00000451247 436 ntBASIC1.9□□□□□ -2.11
GTF2A1P52655 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
GTF2A1P52655 AL121769.1-201ENST00000469473 401 ntBASIC1.9□□□□□ -2.11
GTF2A1P52655 RPS3AP14-201ENST00000483907 780 ntBASIC1.9□□□□□ -2.11
GTF2A1P52655 AC026801.1-201ENST00000497178 464 ntBASIC1.9□□□□□ -2.11
GTF2A1P52655 MTCYBP17-201ENST00000503579 789 ntBASIC1.9□□□□□ -2.11
GTF2A1P52655 AC117525.1-201ENST00000515228 503 ntBASIC1.9□□□□□ -2.11
GTF2A1P52655 AC104057.1-201ENST00000515547 497 ntBASIC1.9□□□□□ -2.11
GTF2A1P52655 SNORA70.16-201ENST00000516390 95 ntBASIC1.9□□□□□ -2.11
GTF2A1P52655 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.9□□□□□ -2.11
GTF2A1P52655 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.9□□□□□ -2.11
GTF2A1P52655 AC234778.2-201ENST00000566241 354 ntBASIC1.9□□□□□ -2.11
GTF2A1P52655 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.9□□□□□ -2.11
GTF2A1P52655 AC120053.1-201ENST00000607706 736 ntBASIC1.9□□□□□ -2.11
GTF2A1P52655 AC106052.1-201ENST00000608029 497 ntBASIC1.9□□□□□ -2.11
GTF2A1P52655 AC103710.4-201ENST00000609301 899 ntBASIC1.9□□□□□ -2.11
GTF2A1P52655 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.9□□□□□ -2.11
GTF2A1P52655 MIR7515-201ENST00000637837 67 ntBASIC1.9□□□□□ -2.11
GTF2A1P52655 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.9□□□□□ -2.11
GTF2A1P52655 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.9□□□□□ -2.11
GTF2A1P52655 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
GTF2A1P52655 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
GTF2A1P52655 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
GTF2A1P52655 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
GTF2A1P52655 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 FTLP6-201ENST00000355274 422 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 MIR147B-201ENST00000390185 80 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 BTF3P7-201ENST00000407097 488 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 TATDN1P1-201ENST00000414123 891 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.89□□□□□ -2.11
GTF2A1P52655 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.89□□□□□ -2.11
GTF2A1P52655 USP12PX-201ENST00000432383 1057 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 MRPL35P4-201ENST00000453682 566 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 AC140059.1-201ENST00000489238 361 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 AC096745.1-201ENST00000509945 370 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 RNA5SP281-201ENST00000516504 135 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.89□□□□□ -2.11
GTF2A1P52655 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.89□□□□□ -2.11
GTF2A1P52655 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.89□□□□□ -2.11
GTF2A1P52655 AC011260.1-201ENST00000578420 472 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 AC022069.1-201ENST00000582910 658 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 MIR7106-201ENST00000612419 65 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 AC135507.2-201ENST00000612443 309 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 AC004852.3-201ENST00000614131 326 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.89□□□□□ -2.11
GTF2A1P52655 AP006248.3-201ENST00000623580 594 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.89□□□□□ -2.11
GTF2A1P52655 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.89□□□□□ -2.11
GTF2A1P52655 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
GTF2A1P52655 MTCO1P4-201ENST00000520516 1409 ntBASIC1.89□□□□□ -2.11
GTF2A1P52655 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
GTF2A1P52655 AC009487.4-201ENST00000624969 3585 ntBASIC1.88□□□□□ -2.11
GTF2A1P52655 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
GTF2A1P52655 SNORA80A-201ENST00000363922 136 ntBASIC1.88□□□□□ -2.11
GTF2A1P52655 RNU6-7-201ENST00000364784 107 ntBASIC1.88□□□□□ -2.11
GTF2A1P52655 RNU6-8-201ENST00000365467 107 ntBASIC1.88□□□□□ -2.11
GTF2A1P52655 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.88□□□□□ -2.11
GTF2A1P52655 AL122016.1-201ENST00000403365 367 ntBASIC1.88□□□□□ -2.11
GTF2A1P52655 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.88□□□□□ -2.11
GTF2A1P52655 PTP4A1P7-201ENST00000423476 514 ntBASIC1.88□□□□□ -2.11
GTF2A1P52655 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.88□□□□□ -2.11
GTF2A1P52655 CYCSP32-201ENST00000440548 321 ntBASIC1.88□□□□□ -2.11
GTF2A1P52655 Z99127.2-201ENST00000441426 334 ntBASIC1.88□□□□□ -2.11
GTF2A1P52655 AC087884.1-201ENST00000469738 328 ntBASIC1.88□□□□□ -2.11
GTF2A1P52655 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.88□□□□□ -2.11
GTF2A1P52655 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
GTF2A1P52655 SNORA31.25-201ENST00000517242 134 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms