Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRIM1P49642 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC6.77□□□□□ -1.32
PRIM1P49642 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
PRIM1P49642 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
PRIM1P49642 AP001029.2-203ENST00000589795 4910 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PRIM1P49642 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
PRIM1P49642 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
PRIM1P49642 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
PRIM1P49642 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PRIM1P49642 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PRIM1P49642 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PRIM1P49642 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
PRIM1P49642 AC000374.1-201ENST00000434698 1745 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
PRIM1P49642 RNU6-1317P-201ENST00000364582 104 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 Y_RNA.506-201ENST00000384494 102 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 RNU6-817P-201ENST00000391083 104 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 GLULP6-201ENST00000399502 913 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 AL603910.2-201ENST00000407268 136 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 MIR1298-201ENST00000408783 112 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 AL451074.5-201ENST00000415894 435 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 RPS29P10-201ENST00000439197 166 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 SNORD125-201ENST00000459538 96 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 RN7SL188P-201ENST00000469842 285 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 RN7SL244P-201ENST00000493405 297 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
PRIM1P49642 RN7SKP60-201ENST00000516985 239 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.77□□□□□ -1.33
PRIM1P49642 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.77□□□□□ -1.33
PRIM1P49642 CR383656.7-201ENST00000548164 174 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
PRIM1P49642 OR1M4P-201ENST00000589199 287 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 AC005344.1-201ENST00000613391 459 ntBASIC6.77□□□□□ -1.33
PRIM1P49642 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
PRIM1P49642 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
PRIM1P49642 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PRIM1P49642 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PRIM1P49642 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PRIM1P49642 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.76□□□□□ -1.33
PRIM1P49642 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PRIM1P49642 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.76□□□□□ -1.33
PRIM1P49642 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PRIM1P49642 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.76□□□□□ -1.33
PRIM1P49642 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.76□□□□□ -1.33
PRIM1P49642 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PRIM1P49642 Y_RNA.54-201ENST00000362766 105 ntBASIC6.76□□□□□ -1.33
PRIM1P49642 RNY3P11-201ENST00000364153 102 ntBASIC6.76□□□□□ -1.33
PRIM1P49642 AC119751.6-201ENST00000416712 186 ntBASIC6.76□□□□□ -1.33
PRIM1P49642 RPL21P38-201ENST00000418090 167 ntBASIC6.76□□□□□ -1.33
PRIM1P49642 AC068287.1-201ENST00000430283 295 ntBASIC6.76□□□□□ -1.33
PRIM1P49642 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.76□□□□□ -1.33
PRIM1P49642 GAPDHP27-201ENST00000447427 1020 ntBASIC6.76□□□□□ -1.33
PRIM1P49642 RPL29P29-201ENST00000448725 423 ntBASIC6.76□□□□□ -1.33
PRIM1P49642 COX6B1P5-201ENST00000509843 249 ntBASIC6.76□□□□□ -1.33
PRIM1P49642 AC104576.1-201ENST00000524225 88 ntBASIC6.76□□□□□ -1.33
PRIM1P49642 AP006587.4-201ENST00000526053 529 ntBASIC6.76□□□□□ -1.33
PRIM1P49642 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC6.76□□□□□ -1.33
PRIM1P49642 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.76□□□□□ -1.33
PRIM1P49642 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.76□□□□□ -1.33
PRIM1P49642 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.76□□□□□ -1.33
PRIM1P49642 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PRIM1P49642 AC027287.1-201ENST00000553115 1453 ntBASIC6.76□□□□□ -1.33
PRIM1P49642 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.76□□□□□ -1.33
PRIM1P49642 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
PRIM1P49642 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PRIM1P49642 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PRIM1P49642 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PRIM1P49642 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PRIM1P49642 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.76□□□□□ -1.33
PRIM1P49642 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.76□□□□□ -1.33
PRIM1P49642 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PRIM1P49642 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PRIM1P49642 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PRIM1P49642 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.75□□□□□ -1.33
PRIM1P49642 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PRIM1P49642 RN7SKP145-201ENST00000363291 303 ntBASIC6.75□□□□□ -1.33
PRIM1P49642 Y_RNA.122-201ENST00000363331 96 ntBASIC6.75□□□□□ -1.33
PRIM1P49642 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PRIM1P49642 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PRIM1P49642 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.75□□□□□ -1.33
PRIM1P49642 AL080315.1-201ENST00000406055 466 ntBASIC6.75□□□□□ -1.33
PRIM1P49642 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PRIM1P49642 AL513124.1-201ENST00000450410 614 ntBASIC6.75□□□□□ -1.33
PRIM1P49642 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PRIM1P49642 RN7SL197P-201ENST00000466981 299 ntBASIC6.75□□□□□ -1.33
PRIM1P49642 RPL7P23-201ENST00000493874 747 ntBASIC6.75□□□□□ -1.33
PRIM1P49642 AC007016.1-201ENST00000512110 244 ntBASIC6.75□□□□□ -1.33
PRIM1P49642 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.75□□□□□ -1.33
PRIM1P49642 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.75□□□□□ -1.33
PRIM1P49642 SULT1C2P2-201ENST00000562517 294 ntBASIC6.75□□□□□ -1.33
PRIM1P49642 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.75□□□□□ -1.33
PRIM1P49642 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC6.75□□□□□ -1.33
PRIM1P49642 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.75□□□□□ -1.33
PRIM1P49642 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PRIM1P49642 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PRIM1P49642 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PRIM1P49642 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PRIM1P49642 MAPK10-328ENST00000641553 4009 ntBASIC6.75□□□□□ -1.33
PRIM1P49642 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms