Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA4P43681 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.2□□□□□ -1.58
CHRNA4P43681 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA4P43681 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CHRNA4P43681 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA4P43681 AC133552.1-201ENST00000569988 4007 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA4P43681 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CHRNA4P43681 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA4P43681 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
CHRNA4P43681 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA4P43681 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA4P43681 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CHRNA4P43681 AC092376.2-201ENST00000622621 4116 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.19□□□□□ -1.58
CHRNA4P43681 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA4P43681 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CHRNA4P43681 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA4P43681 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CHRNA4P43681 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CHRNA4P43681 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA4P43681 RNU6-729P-201ENST00000384399 107 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CHRNA4P43681 MIR937-201ENST00000401271 86 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 U3.32-201ENST00000408116 212 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 HMGN1P24-201ENST00000412282 298 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 BX510359.3-201ENST00000422168 306 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.19□□□□□ -1.58
CHRNA4P43681 AL513124.1-201ENST00000450410 614 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.19□□□□□ -1.58
CHRNA4P43681 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.19□□□□□ -1.58
CHRNA4P43681 AP000942.1-201ENST00000463969 747 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA4P43681 AC093853.1-201ENST00000515689 483 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.19□□□□□ -1.58
CHRNA4P43681 AC009643.1-201ENST00000532030 391 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.19□□□□□ -1.58
CHRNA4P43681 MRPS18CP4-201ENST00000535821 231 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 AC024940.3-201ENST00000538551 316 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 AL358913.1-201ENST00000554342 121 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.19□□□□□ -1.58
CHRNA4P43681 AC018552.1-201ENST00000562099 811 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.19□□□□□ -1.58
CHRNA4P43681 RPL23AP92-201ENST00000603609 255 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 AC006363.1-201ENST00000603806 463 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 AC023813.4-201ENST00000607580 580 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 AC211433.2-201ENST00000608433 387 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 MIR1244-1-201ENST00000612829 85 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 RPSAP73-201ENST00000614820 330 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 MIR376A1-201ENST00000616574 68 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 CYP3A51P-201ENST00000633513 256 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 MIR1244-3-201ENST00000635744 85 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 MIR1244-2-201ENST00000636449 85 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 MIR1244-4-202ENST00000636813 85 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA4P43681 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CHRNA4P43681 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.19□□□□□ -1.58
CHRNA4P43681 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA4P43681 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.19□□□□□ -1.58
CHRNA4P43681 BX322639.1-202ENST00000423987 2213 ntBASIC5.19□□□□□ -1.58
CHRNA4P43681 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHRNA4P43681 AC073136.1-201ENST00000449426 2884 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA4P43681 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA4P43681 PANDAR-201ENST00000629595 1506 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA4P43681 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CHRNA4P43681 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA4P43681 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA4P43681 AL138820.1-201ENST00000617901 5305 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 U3.7-201ENST00000363668 216 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 RNU6-1303P-201ENST00000364841 107 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 RNY4P28-201ENST00000365281 93 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CHRNA4P43681 RPS29P13-201ENST00000402041 169 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 AL024474.1-201ENST00000404655 591 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 AL035079.1-201ENST00000405210 287 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.18□□□□□ -1.58
CHRNA4P43681 BX323845.1-201ENST00000432417 179 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 RPL7AP61-201ENST00000443410 636 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.18□□□□□ -1.58
CHRNA4P43681 AC239809.1-201ENST00000450470 217 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 RN7SL222P-201ENST00000476452 299 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.18□□□□□ -1.58
CHRNA4P43681 RPS23P1-201ENST00000491662 432 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 YWHAEP4-201ENST00000505390 198 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.18□□□□□ -1.58
CHRNA4P43681 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.18□□□□□ -1.58
CHRNA4P43681 SNORA70.11-201ENST00000515987 138 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 SNORA70.13-201ENST00000516116 138 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 RNU6-1092P-201ENST00000516955 87 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 SOD1P3-201ENST00000518682 454 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.18□□□□□ -1.58
CHRNA4P43681 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.18□□□□□ -1.58
CHRNA4P43681 MIR4300-201ENST00000581016 96 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.18□□□□□ -1.58
CHRNA4P43681 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.18□□□□□ -1.58
CHRNA4P43681 OR7E18P-201ENST00000592589 702 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 AC108706.1-201ENST00000611053 297 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms