Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.9□□□□□ -1.95
SSR1P43307 AC125611.1-201ENST00000549563 229 ntBASIC2.9□□□□□ -1.95
SSR1P43307 SETP7-201ENST00000552169 453 ntBASIC2.9□□□□□ -1.95
SSR1P43307 AC121758.2-201ENST00000553271 193 ntBASIC2.9□□□□□ -1.95
SSR1P43307 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.9□□□□□ -1.95
SSR1P43307 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.9□□□□□ -1.95
SSR1P43307 AMZ2P1-203ENST00000565833 850 ntBASIC2.9□□□□□ -1.95
SSR1P43307 AC104072.1-201ENST00000568817 668 ntBASIC2.9□□□□□ -1.95
SSR1P43307 MIR3609-201ENST00000582661 80 ntBASIC2.9□□□□□ -1.95
SSR1P43307 BNIP3P24-201ENST00000593398 557 ntBASIC2.9□□□□□ -1.95
SSR1P43307 AC079089.3-201ENST00000603094 673 ntBASIC2.9□□□□□ -1.95
SSR1P43307 AP000943.4-201ENST00000622912 357 ntBASIC2.9□□□□□ -1.95
SSR1P43307 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.9□□□□□ -1.95
SSR1P43307 AC079597.1-201ENST00000624306 508 ntBASIC2.9□□□□□ -1.95
SSR1P43307 AC096644.4-201ENST00000563417 2912 ntBASIC2.9□□□□□ -1.95
SSR1P43307 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSR1P43307 RNU6-173P-201ENST00000364215 104 ntBASIC2.89□□□□□ -1.95
SSR1P43307 SNORA18.3-201ENST00000384122 132 ntBASIC2.89□□□□□ -1.95
SSR1P43307 RNA5SP354-201ENST00000391247 136 ntBASIC2.89□□□□□ -1.95
SSR1P43307 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.89□□□□□ -1.95
SSR1P43307 AL592148.1-201ENST00000413568 445 ntBASIC2.89□□□□□ -1.95
SSR1P43307 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.89□□□□□ -1.95
SSR1P43307 AL449283.1-202ENST00000418249 604 ntBASIC2.89□□□□□ -1.95
SSR1P43307 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.89□□□□□ -1.95
SSR1P43307 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.89□□□□□ -1.95
SSR1P43307 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.89□□□□□ -1.95
SSR1P43307 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.89□□□□□ -1.95
SSR1P43307 AC004866.2-201ENST00000438285 481 ntBASIC2.89□□□□□ -1.95
SSR1P43307 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSR1P43307 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.89□□□□□ -1.95
SSR1P43307 RN7SL297P-201ENST00000483161 293 ntBASIC2.89□□□□□ -1.95
SSR1P43307 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SSR1P43307 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.89□□□□□ -1.95
SSR1P43307 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.89□□□□□ -1.95
SSR1P43307 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.89□□□□□ -1.95
SSR1P43307 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.89□□□□□ -1.95
SSR1P43307 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SSR1P43307 AP000857.1-201ENST00000532151 543 ntBASIC2.89□□□□□ -1.95
SSR1P43307 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.89□□□□□ -1.95
SSR1P43307 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.89□□□□□ -1.95
SSR1P43307 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSR1P43307 TRAV28-201ENST00000557548 323 ntBASIC2.89□□□□□ -1.95
SSR1P43307 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.89□□□□□ -1.95
SSR1P43307 MTND4LP25-201ENST00000570218 163 ntBASIC2.89□□□□□ -1.95
SSR1P43307 AL031176.1-201ENST00000604554 466 ntBASIC2.89□□□□□ -1.95
SSR1P43307 AC006213.4-201ENST00000616184 634 ntBASIC2.89□□□□□ -1.95
SSR1P43307 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
SSR1P43307 AC004009.2-201ENST00000623016 728 ntBASIC2.89□□□□□ -1.95
SSR1P43307 AC109315.1-201ENST00000584143 1347 ntBASIC2.89□□□□□ -1.95
SSR1P43307 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.89□□□□□ -1.95
SSR1P43307 AC080100.1-201ENST00000624239 5356 ntBASIC2.88□□□□□ -1.95
SSR1P43307 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSR1P43307 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSR1P43307 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSR1P43307 SNORA80E-201ENST00000384744 137 ntBASIC2.88□□□□□ -1.95
SSR1P43307 MIR592-201ENST00000384959 97 ntBASIC2.88□□□□□ -1.95
SSR1P43307 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SSR1P43307 RNA5SP210-201ENST00000391034 120 ntBASIC2.88□□□□□ -1.95
SSR1P43307 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.88□□□□□ -1.95
SSR1P43307 RPL7P44-201ENST00000424827 742 ntBASIC2.88□□□□□ -1.95
SSR1P43307 MTND2P5-201ENST00000432656 1006 ntBASIC2.88□□□□□ -1.95
SSR1P43307 OFD1P3Y-201ENST00000453312 783 ntBASIC2.88□□□□□ -1.95
SSR1P43307 AL139109.1-201ENST00000455491 297 ntBASIC2.88□□□□□ -1.95
SSR1P43307 AC026410.2-201ENST00000460281 156 ntBASIC2.88□□□□□ -1.95
SSR1P43307 RPS27P26-201ENST00000494583 239 ntBASIC2.88□□□□□ -1.95
SSR1P43307 AC113420.1-201ENST00000507903 571 ntBASIC2.88□□□□□ -1.95
SSR1P43307 RN7SKP31-201ENST00000516354 278 ntBASIC2.88□□□□□ -1.95
SSR1P43307 RNA5SP402-201ENST00000517148 110 ntBASIC2.88□□□□□ -1.95
SSR1P43307 SNORA70.24-201ENST00000517233 118 ntBASIC2.88□□□□□ -1.95
SSR1P43307 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.88□□□□□ -1.95
SSR1P43307 ISCA1P3-201ENST00000577104 373 ntBASIC2.88□□□□□ -1.95
SSR1P43307 MIR4325-201ENST00000583049 90 ntBASIC2.88□□□□□ -1.95
SSR1P43307 AP002802.2-201ENST00000605877 235 ntBASIC2.88□□□□□ -1.95
SSR1P43307 AC245884.12-201ENST00000615364 59 ntBASIC2.88□□□□□ -1.95
SSR1P43307 AC120349.2-201ENST00000625002 298 ntBASIC2.88□□□□□ -1.95
SSR1P43307 MIR1322-201ENST00000638013 71 ntBASIC2.88□□□□□ -1.95
SSR1P43307 AC009812.4-201ENST00000569134 1805 ntBASIC2.88□□□□□ -1.95
SSR1P43307 AC010680.1-201ENST00000590024 3590 ntBASIC2.88□□□□□ -1.95
SSR1P43307 AC107982.1-201ENST00000507171 1300 ntBASIC2.88□□□□□ -1.95
SSR1P43307 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.87□□□□□ -1.95
SSR1P43307 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSR1P43307 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SSR1P43307 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSR1P43307 MIR6073-201ENST00000352083 89 ntBASIC2.87□□□□□ -1.95
SSR1P43307 AL513475.1-201ENST00000406602 315 ntBASIC2.87□□□□□ -1.95
SSR1P43307 RPS3AP24-201ENST00000407896 734 ntBASIC2.87□□□□□ -1.95
SSR1P43307 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.87□□□□□ -1.95
SSR1P43307 AF274854.1-201ENST00000413236 615 ntBASIC2.87□□□□□ -1.95
SSR1P43307 USP9YP21-201ENST00000420603 432 ntBASIC2.87□□□□□ -1.95
SSR1P43307 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.87□□□□□ -1.95
SSR1P43307 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.87□□□□□ -1.95
SSR1P43307 AC112653.1-201ENST00000443851 386 ntBASIC2.87□□□□□ -1.95
SSR1P43307 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.87□□□□□ -1.95
SSR1P43307 MRPL50P4-201ENST00000446432 475 ntBASIC2.87□□□□□ -1.95
SSR1P43307 NANOGNBP1-201ENST00000448444 480 ntBASIC2.87□□□□□ -1.95
SSR1P43307 RSL24D1P3-201ENST00000449255 495 ntBASIC2.87□□□□□ -1.95
SSR1P43307 TRGVB-201ENST00000453257 471 ntBASIC2.87□□□□□ -1.95
SSR1P43307 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.87□□□□□ -1.95
SSR1P43307 snoU13.22-201ENST00000459428 104 ntBASIC2.87□□□□□ -1.95
SSR1P43307 RPL31P41-201ENST00000477967 372 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms