Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AP000553.6-201ENST00000641242 118 ntBASIC3.36□□□□□ -1.87
APOBEC1P41238 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.36□□□□□ -1.87
APOBEC1P41238 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.36□□□□□ -1.87
APOBEC1P41238 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APOBEC1P41238 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.36□□□□□ -1.87
APOBEC1P41238 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOBEC1P41238 AC138915.3-201ENST00000562908 1389 ntBASIC3.36□□□□□ -1.87
APOBEC1P41238 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
APOBEC1P41238 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.36□□□□□ -1.87
APOBEC1P41238 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
APOBEC1P41238 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
APOBEC1P41238 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBEC1P41238 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.35□□□□□ -1.87
APOBEC1P41238 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
APOBEC1P41238 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 AP001486.2-201ENST00000561652 5113 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
APOBEC1P41238 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBEC1P41238 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBEC1P41238 AC092326.2-201ENST00000624772 1561 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBEC1P41238 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBEC1P41238 OR1S2-201ENST00000302592 978 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
APOBEC1P41238 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
APOBEC1P41238 RNU5E-1-201ENST00000362477 120 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 RNU1-18P-201ENST00000363062 164 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 RNY1P12-201ENST00000364251 105 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
APOBEC1P41238 RNU6-259P-201ENST00000383999 107 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 RNU6-76P-201ENST00000384060 104 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBEC1P41238 RNU6-195P-201ENST00000411352 109 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.35□□□□□ -1.87
APOBEC1P41238 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.35□□□□□ -1.87
APOBEC1P41238 HMGB3P20-201ENST00000417997 600 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.35□□□□□ -1.87
APOBEC1P41238 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.35□□□□□ -1.87
APOBEC1P41238 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 MTATP6P4-201ENST00000427725 675 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.35□□□□□ -1.87
APOBEC1P41238 AC104850.1-201ENST00000435940 476 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 ATP5C1P1-201ENST00000441945 895 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 NANOGP10-201ENST00000453325 895 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 AC011825.1-201ENST00000484967 388 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.35□□□□□ -1.87
APOBEC1P41238 KCTD9P5-201ENST00000504141 1170 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
APOBEC1P41238 AC020593.1-201ENST00000507399 299 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.35□□□□□ -1.87
APOBEC1P41238 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.35□□□□□ -1.87
APOBEC1P41238 AC011979.2-201ENST00000527568 352 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBEC1P41238 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.35□□□□□ -1.87
APOBEC1P41238 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.35□□□□□ -1.87
APOBEC1P41238 AC009063.1-201ENST00000563342 702 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 AL391840.1-201ENST00000571144 367 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 AP001330.4-201ENST00000604350 154 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 RNU1-30P-201ENST00000606575 163 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBEC1P41238 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBEC1P41238 AC006023.2-201ENST00000609916 167 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBEC1P41238 AC006338.1-201ENST00000618453 749 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 AC244205.2-202ENST00000635781 342 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBEC1P41238 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOBEC1P41238 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.35□□□□□ -1.87
APOBEC1P41238 MAPK10-372ENST00000641954 3413 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 MTND5P29-201ENST00000458676 1807 ntBASIC3.35□□□□□ -1.87
APOBEC1P41238 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.35□□□□□ -1.87
APOBEC1P41238 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.34□□□□□ -1.87
APOBEC1P41238 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
APOBEC1P41238 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
APOBEC1P41238 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
APOBEC1P41238 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
APOBEC1P41238 AC007685.1-201ENST00000329806 452 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 RNU4-1-201ENST00000363925 141 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 RNA5SP479-201ENST00000364858 117 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 RNU6-192P-201ENST00000391253 100 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 RPL7P60-201ENST00000397636 735 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 AL445189.1-201ENST00000405722 338 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 RNA5SP107-201ENST00000411358 122 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 RNU2-71P-201ENST00000411395 189 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.34□□□□□ -1.87
APOBEC1P41238 ELOCP4-201ENST00000420090 333 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 PIGFP2-201ENST00000421400 651 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.34□□□□□ -1.87
APOBEC1P41238 USP9YP36-201ENST00000424581 829 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.34□□□□□ -1.87
APOBEC1P41238 RBM43P1-201ENST00000476891 1081 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.34□□□□□ -1.87
APOBEC1P41238 NIPA2P2-201ENST00000496376 1083 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 AC068305.1-201ENST00000497406 726 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 AC105252.1-201ENST00000503089 286 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 MTND2P33-201ENST00000506452 1031 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 AC002456.2-201ENST00000509356 380 ntBASIC3.34□□□□□ -1.87
APOBEC1P41238 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.34□□□□□ -1.87
APOBEC1P41238 AC026402.1-201ENST00000513642 170 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms