Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 ZNF833P-201ENST00000424938 1494 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 FAM35BP-202ENST00000497389 3337 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HNF4AP41235 RNU6-500P-201ENST00000362349 107 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 Y_RNA.51-201ENST00000362725 102 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 RNA5SP139-201ENST00000364340 117 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 RNU6-253P-201ENST00000384730 105 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 USP9YP33-201ENST00000412220 421 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.37□□□□□ -1.87
HNF4AP41235 BTF3L4P1-201ENST00000413813 468 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 RPS29P4-201ENST00000414733 161 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.37□□□□□ -1.87
HNF4AP41235 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.37□□□□□ -1.87
HNF4AP41235 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.37□□□□□ -1.87
HNF4AP41235 CYCSP4-201ENST00000429682 331 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 AC098826.1-201ENST00000433943 471 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 USP9YP35-201ENST00000435696 412 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 MTCO2P16-201ENST00000436962 677 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.37□□□□□ -1.87
HNF4AP41235 TAF9P1-201ENST00000445421 515 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.37□□□□□ -1.87
HNF4AP41235 SNRPGP6-201ENST00000451124 220 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.37□□□□□ -1.87
HNF4AP41235 TAF9P2-201ENST00000454958 515 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 BX322784.1-201ENST00000455793 1077 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 RPL7P15-201ENST00000461190 712 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 RAP1BP2-201ENST00000478270 544 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 HSPE1P6-201ENST00000479457 291 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 AC025518.1-201ENST00000479856 347 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 AC020893.1-201ENST00000502452 580 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HNF4AP41235 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.37□□□□□ -1.87
HNF4AP41235 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.37□□□□□ -1.87
HNF4AP41235 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.37□□□□□ -1.87
HNF4AP41235 AC011602.1-201ENST00000546484 331 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 OR6C7P-201ENST00000547875 934 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.37□□□□□ -1.87
HNF4AP41235 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.37□□□□□ -1.87
HNF4AP41235 HMGB1P14-201ENST00000557424 591 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 ROCK1P1-201ENST00000573767 549 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 MIR3158-1-201ENST00000583596 81 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 MIR3922-201ENST00000585192 84 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 AC024560.3-201ENST00000608482 349 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 AC011939.3-201ENST00000613686 466 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 AC006133.1-201ENST00000617106 264 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 AC092192.1-201ENST00000633154 1018 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.37□□□□□ -1.87
HNF4AP41235 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 AC009093.8-201ENST00000641769 292 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 SRP72P2-201ENST00000344851 1979 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 AC092435.3-201ENST00000565538 3654 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
HNF4AP41235 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
HNF4AP41235 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HNF4AP41235 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HNF4AP41235 SDAD1P2-201ENST00000441308 2028 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HNF4AP41235 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HNF4AP41235 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HNF4AP41235 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HNF4AP41235 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HNF4AP41235 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HNF4AP41235 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HNF4AP41235 RNU6-952P-201ENST00000391164 108 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 RNU6-55P-201ENST00000411092 107 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 RNU6-954P-201ENST00000411355 107 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 NPM1P11-201ENST00000417106 855 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.36□□□□□ -1.87
HNF4AP41235 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.36□□□□□ -1.87
HNF4AP41235 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.36□□□□□ -1.87
HNF4AP41235 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.36□□□□□ -1.87
HNF4AP41235 AP000907.1-201ENST00000428428 510 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AL035407.1-201ENST00000429211 571 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AC010153.1-201ENST00000432862 727 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.36□□□□□ -1.87
HNF4AP41235 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.36□□□□□ -1.87
HNF4AP41235 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.36□□□□□ -1.87
HNF4AP41235 AC009961.3-201ENST00000449832 765 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.36□□□□□ -1.87
HNF4AP41235 AC010401.1-201ENST00000463867 348 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 RPL23AP67-201ENST00000465341 474 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 RPL31P50-201ENST00000471002 296 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 RPL7P5-201ENST00000471472 736 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AC072039.1-201ENST00000477611 581 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AC106707.2-201ENST00000484182 374 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.36□□□□□ -1.87
HNF4AP41235 SNORA67.7-201ENST00000516664 135 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 DEFB131D-201ENST00000526803 184 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HNF4AP41235 AC007115.1-201ENST00000546853 234 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.36□□□□□ -1.87
HNF4AP41235 AC125611.2-201ENST00000551907 647 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AC007954.1-201ENST00000554198 494 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.36□□□□□ -1.87
HNF4AP41235 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.36□□□□□ -1.87
HNF4AP41235 VN1R92P-201ENST00000598511 928 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AF131215.7-201ENST00000602443 707 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms