Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 SAGE4P-201ENST00000442271 3381 ntBASIC3.65□□□□□ -1.83
USP8P40818 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
USP8P40818 AC093908.1-201ENST00000623125 8092 ntBASIC3.65□□□□□ -1.83
USP8P40818 MFSD8-233ENST00000641482 4860 ntBASIC3.65□□□□□ -1.83
USP8P40818 AL136164.4-201ENST00000625013 2135 ntBASIC3.65□□□□□ -1.83
USP8P40818 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.65□□□□□ -1.83
USP8P40818 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.65□□□□□ -1.83
USP8P40818 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.65□□□□□ -1.83
USP8P40818 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP8P40818 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP8P40818 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.64□□□□□ -1.83
USP8P40818 SNORD17-201ENST00000390930 237 ntBASIC3.64□□□□□ -1.83
USP8P40818 AL354719.1-201ENST00000406535 843 ntBASIC3.64□□□□□ -1.83
USP8P40818 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.64□□□□□ -1.83
USP8P40818 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.64□□□□□ -1.83
USP8P40818 OFD1P18Y-201ENST00000420889 959 ntBASIC3.64□□□□□ -1.83
USP8P40818 RPL23AP82-202ENST00000427528 469 ntBASIC3.64□□□□□ -1.83
USP8P40818 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.64□□□□□ -1.83
USP8P40818 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.64□□□□□ -1.83
USP8P40818 AC091286.1-201ENST00000431233 461 ntBASIC3.64□□□□□ -1.83
USP8P40818 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.64□□□□□ -1.83
USP8P40818 RPL23AP74-201ENST00000437246 471 ntBASIC3.64□□□□□ -1.83
USP8P40818 RPS24P1-201ENST00000438550 371 ntBASIC3.64□□□□□ -1.83
USP8P40818 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP8P40818 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.64□□□□□ -1.83
USP8P40818 SSXP4-201ENST00000451349 245 ntBASIC3.64□□□□□ -1.83
USP8P40818 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP8P40818 CENPBD1P1-201ENST00000464061 469 ntBASIC3.64□□□□□ -1.83
USP8P40818 AC006483.1-201ENST00000487308 313 ntBASIC3.64□□□□□ -1.83
USP8P40818 AC106872.3-201ENST00000495104 446 ntBASIC3.64□□□□□ -1.83
USP8P40818 SAP18P1-201ENST00000512058 390 ntBASIC3.64□□□□□ -1.83
USP8P40818 AC024589.1-201ENST00000512207 263 ntBASIC3.64□□□□□ -1.83
USP8P40818 RN7SKP116-201ENST00000516902 319 ntBASIC3.64□□□□□ -1.83
USP8P40818 AC026403.1-201ENST00000518938 295 ntBASIC3.64□□□□□ -1.83
USP8P40818 OR4R3P-201ENST00000525084 838 ntBASIC3.64□□□□□ -1.83
USP8P40818 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.64□□□□□ -1.83
USP8P40818 AL391156.1-201ENST00000554965 554 ntBASIC3.64□□□□□ -1.83
USP8P40818 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.64□□□□□ -1.83
USP8P40818 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.64□□□□□ -1.83
USP8P40818 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.64□□□□□ -1.83
USP8P40818 MTCO3P24-201ENST00000572729 782 ntBASIC3.64□□□□□ -1.83
USP8P40818 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.64□□□□□ -1.83
USP8P40818 MIR5697-201ENST00000578045 78 ntBASIC3.64□□□□□ -1.83
USP8P40818 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.64□□□□□ -1.83
USP8P40818 MIR4307-201ENST00000582802 84 ntBASIC3.64□□□□□ -1.83
USP8P40818 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.64□□□□□ -1.83
USP8P40818 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP8P40818 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.64□□□□□ -1.83
USP8P40818 AC098614.4-201ENST00000607601 462 ntBASIC3.64□□□□□ -1.83
USP8P40818 AC092354.2-201ENST00000607786 514 ntBASIC3.64□□□□□ -1.83
USP8P40818 AL513477.2-201ENST00000607858 568 ntBASIC3.64□□□□□ -1.83
USP8P40818 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.64□□□□□ -1.83
USP8P40818 AC104073.3-201ENST00000610942 955 ntBASIC3.64□□□□□ -1.83
USP8P40818 AC100793.4-201ENST00000613683 429 ntBASIC3.64□□□□□ -1.83
USP8P40818 AL357080.1-201ENST00000617394 239 ntBASIC3.64□□□□□ -1.83
USP8P40818 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.64□□□□□ -1.83
USP8P40818 AC026585.1-201ENST00000619582 524 ntBASIC3.64□□□□□ -1.83
USP8P40818 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.64□□□□□ -1.83
USP8P40818 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.64□□□□□ -1.83
USP8P40818 MIR4496-201ENST00000635896 61 ntBASIC3.64□□□□□ -1.83
USP8P40818 AL392088.2-201ENST00000637607 285 ntBASIC3.64□□□□□ -1.83
USP8P40818 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.64□□□□□ -1.83
USP8P40818 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
USP8P40818 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.64□□□□□ -1.83
USP8P40818 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.64□□□□□ -1.83
USP8P40818 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
USP8P40818 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP8P40818 AC006378.2-201ENST00000623178 2476 ntBASIC3.63□□□□□ -1.83
USP8P40818 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP8P40818 RNU5E-5P-201ENST00000365379 116 ntBASIC3.63□□□□□ -1.83
USP8P40818 RNU6-769P-201ENST00000384407 104 ntBASIC3.63□□□□□ -1.83
USP8P40818 MIR200C-201ENST00000384980 68 ntBASIC3.63□□□□□ -1.83
USP8P40818 PTMAP2-201ENST00000397627 327 ntBASIC3.63□□□□□ -1.83
USP8P40818 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.63□□□□□ -1.83
USP8P40818 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP8P40818 RN7SKP58-201ENST00000411010 305 ntBASIC3.63□□□□□ -1.83
USP8P40818 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.63□□□□□ -1.83
USP8P40818 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.63□□□□□ -1.83
USP8P40818 AL356583.2-201ENST00000426536 280 ntBASIC3.63□□□□□ -1.83
USP8P40818 PSMA6P3-201ENST00000428242 164 ntBASIC3.63□□□□□ -1.83
USP8P40818 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.63□□□□□ -1.83
USP8P40818 HMGN2P31-201ENST00000432430 273 ntBASIC3.63□□□□□ -1.83
USP8P40818 VDAC1P3-201ENST00000434069 851 ntBASIC3.63□□□□□ -1.83
USP8P40818 RPL37P21-201ENST00000435890 276 ntBASIC3.63□□□□□ -1.83
USP8P40818 MTND1P34-201ENST00000438556 671 ntBASIC3.63□□□□□ -1.83
USP8P40818 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.63□□□□□ -1.83
USP8P40818 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.63□□□□□ -1.83
USP8P40818 AL031667.1-201ENST00000440222 725 ntBASIC3.63□□□□□ -1.83
USP8P40818 AP000542.1-201ENST00000448473 371 ntBASIC3.63□□□□□ -1.83
USP8P40818 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.63□□□□□ -1.83
USP8P40818 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.63□□□□□ -1.83
USP8P40818 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.63□□□□□ -1.83
USP8P40818 RNA5SP269-201ENST00000459032 137 ntBASIC3.63□□□□□ -1.83
USP8P40818 AC093663.1-201ENST00000497190 394 ntBASIC3.63□□□□□ -1.83
USP8P40818 AC021678.1-201ENST00000505195 936 ntBASIC3.63□□□□□ -1.83
USP8P40818 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.63□□□□□ -1.83
USP8P40818 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.63□□□□□ -1.83
USP8P40818 FCF1P8-201ENST00000510322 597 ntBASIC3.63□□□□□ -1.83
USP8P40818 AC093677.1-201ENST00000514414 678 ntBASIC3.63□□□□□ -1.83
USP8P40818 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 413.9 ms