Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.98□□□□□ -1.77
CIITAP33076 AC127526.1-201ENST00000417526 366 ntBASIC3.98□□□□□ -1.77
CIITAP33076 MTCO2P5-201ENST00000422621 426 ntBASIC3.98□□□□□ -1.77
CIITAP33076 GLRXP1-201ENST00000423261 334 ntBASIC3.98□□□□□ -1.77
CIITAP33076 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.98□□□□□ -1.77
CIITAP33076 PSMA6P3-201ENST00000428242 164 ntBASIC3.98□□□□□ -1.77
CIITAP33076 MRPS18BP2-201ENST00000434310 759 ntBASIC3.98□□□□□ -1.77
CIITAP33076 AC009961.2-201ENST00000435771 251 ntBASIC3.98□□□□□ -1.77
CIITAP33076 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CIITAP33076 FAM103A2P-201ENST00000444122 354 ntBASIC3.98□□□□□ -1.77
CIITAP33076 MTND1P1-201ENST00000445453 368 ntBASIC3.98□□□□□ -1.77
CIITAP33076 AL358232.1-201ENST00000448030 501 ntBASIC3.98□□□□□ -1.77
CIITAP33076 RPS20P24-201ENST00000457473 361 ntBASIC3.98□□□□□ -1.77
CIITAP33076 RN7SL293P-201ENST00000481765 281 ntBASIC3.98□□□□□ -1.77
CIITAP33076 AC093677.1-201ENST00000514414 678 ntBASIC3.98□□□□□ -1.77
CIITAP33076 RNU2-27P-201ENST00000516185 142 ntBASIC3.98□□□□□ -1.77
CIITAP33076 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.98□□□□□ -1.77
CIITAP33076 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.98□□□□□ -1.77
CIITAP33076 MTCYBP41-201ENST00000528913 1123 ntBASIC3.98□□□□□ -1.77
CIITAP33076 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.98□□□□□ -1.77
CIITAP33076 AC026333.2-201ENST00000542164 106 ntBASIC3.98□□□□□ -1.77
CIITAP33076 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.98□□□□□ -1.77
CIITAP33076 RPL21P5-201ENST00000554662 472 ntBASIC3.98□□□□□ -1.77
CIITAP33076 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CIITAP33076 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.98□□□□□ -1.77
CIITAP33076 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.98□□□□□ -1.77
CIITAP33076 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.98□□□□□ -1.77
CIITAP33076 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.98□□□□□ -1.77
CIITAP33076 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.98□□□□□ -1.77
CIITAP33076 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.98□□□□□ -1.77
CIITAP33076 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.98□□□□□ -1.77
CIITAP33076 AC109347.2-201ENST00000610220 349 ntBASIC3.98□□□□□ -1.77
CIITAP33076 AC008250.2-201ENST00000615261 205 ntBASIC3.98□□□□□ -1.77
CIITAP33076 AC108479.2-201ENST00000617314 601 ntBASIC3.98□□□□□ -1.77
CIITAP33076 AL357559.1-201ENST00000622228 274 ntBASIC3.98□□□□□ -1.77
CIITAP33076 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.98□□□□□ -1.77
CIITAP33076 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CIITAP33076 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CIITAP33076 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.98□□□□□ -1.77
CIITAP33076 CEP170P1-201ENST00000502249 4587 ntBASIC3.98□□□□□ -1.77
CIITAP33076 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CIITAP33076 NUP58P1-201ENST00000502546 1738 ntBASIC3.98□□□□□ -1.77
CIITAP33076 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CIITAP33076 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.98□□□□□ -1.77
CIITAP33076 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.97□□□□□ -1.77
CIITAP33076 AC068647.1-201ENST00000489539 2265 ntBASIC3.97□□□□□ -1.77
CIITAP33076 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CIITAP33076 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.97□□□□□ -1.77
CIITAP33076 AC073073.2-201ENST00000609827 2578 ntBASIC3.97□□□□□ -1.77
CIITAP33076 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CIITAP33076 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CIITAP33076 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CIITAP33076 MIR423-201ENST00000362201 94 ntBASIC3.97□□□□□ -1.77
CIITAP33076 U8.3-201ENST00000363321 132 ntBASIC3.97□□□□□ -1.77
CIITAP33076 RNU6-1283P-201ENST00000365314 105 ntBASIC3.97□□□□□ -1.77
CIITAP33076 SNORD82-201ENST00000365530 70 ntBASIC3.97□□□□□ -1.77
CIITAP33076 Y_RNA.548-201ENST00000384656 105 ntBASIC3.97□□□□□ -1.77
CIITAP33076 MIR183-201ENST00000384958 110 ntBASIC3.97□□□□□ -1.77
CIITAP33076 SNORD17-201ENST00000390930 237 ntBASIC3.97□□□□□ -1.77
CIITAP33076 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CIITAP33076 AC093578.1-201ENST00000415219 368 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AC245052.5-201ENST00000416320 649 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AC012065.2-201ENST00000421295 375 ntBASIC3.97□□□□□ -1.77
CIITAP33076 MTCYBP5-201ENST00000423752 1135 ntBASIC3.97□□□□□ -1.77
CIITAP33076 MTATP6P13-201ENST00000438531 667 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.97□□□□□ -1.77
CIITAP33076 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.97□□□□□ -1.77
CIITAP33076 snoU109.1-201ENST00000459339 135 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AP001992.1-205ENST00000462248 379 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AC126182.1-201ENST00000478134 357 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AC004924.1-201ENST00000480160 781 ntBASIC3.97□□□□□ -1.77
CIITAP33076 RPS3AP50-201ENST00000487064 803 ntBASIC3.97□□□□□ -1.77
CIITAP33076 FAM172BP-201ENST00000487497 1089 ntBASIC3.97□□□□□ -1.77
CIITAP33076 RPL9P6-201ENST00000492764 598 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AC112204.1-201ENST00000502591 103 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.97□□□□□ -1.77
CIITAP33076 NDUFB4P9-201ENST00000511646 388 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.97□□□□□ -1.77
CIITAP33076 RN7SKP244-201ENST00000516513 307 ntBASIC3.97□□□□□ -1.77
CIITAP33076 RNU6-506P-201ENST00000516553 94 ntBASIC3.97□□□□□ -1.77
CIITAP33076 SNORA18.6-201ENST00000516792 115 ntBASIC3.97□□□□□ -1.77
CIITAP33076 RNU6-430P-201ENST00000517078 107 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AP003467.2-201ENST00000520175 319 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AC007458.1-201ENST00000542812 373 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.97□□□□□ -1.77
CIITAP33076 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.97□□□□□ -1.77
CIITAP33076 AC087883.1-201ENST00000551882 391 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.97□□□□□ -1.77
CIITAP33076 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.97□□□□□ -1.77
CIITAP33076 AC136619.2-201ENST00000563361 631 ntBASIC3.97□□□□□ -1.77
CIITAP33076 SNORD84-203ENST00000584275 78 ntBASIC3.97□□□□□ -1.77
CIITAP33076 HMGN1P30-201ENST00000589286 268 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AC091304.9-201ENST00000612091 226 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AL391261.4-201ENST00000616012 481 ntBASIC3.97□□□□□ -1.77
CIITAP33076 AC015967.1-201ENST00000619893 476 ntBASIC3.97□□□□□ -1.77
CIITAP33076 OR5AK4P-201ENST00000635912 903 ntBASIC3.97□□□□□ -1.77
CIITAP33076 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.97□□□□□ -1.77
CIITAP33076 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CIITAP33076 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
CIITAP33076 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms