Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXC13P31276 AL353691.1-201ENST00000451332 387 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXC13P31276 ATG12P2-201ENST00000456830 416 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXC13P31276 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXC13P31276 CBX3P3-201ENST00000508108 532 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXC13P31276 PHBP14-201ENST00000512887 367 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 AC006499.2-201ENST00000513470 337 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC13P31276 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXC13P31276 AC024909.2-201ENST00000553035 286 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 OR4H12P-201ENST00000556269 907 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXC13P31276 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXC13P31276 AC090615.1-201ENST00000577519 154 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 AC079089.3-201ENST00000603094 673 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 DUXAP11-201ENST00000603858 526 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 AC006270.3-201ENST00000605967 1036 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 AL357078.3-201ENST00000607528 618 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 AP001596.2-201ENST00000608410 312 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
HOXC13P31276 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC13P31276 FAM35CP-201ENST00000554755 2470 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 FAM35BP-202ENST00000497389 3337 ntBASIC3.62□□□□□ -1.83
HOXC13P31276 AC008568.2-201ENST00000623862 2313 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC13P31276 MTND5P24-201ENST00000438892 1767 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC13P31276 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC13P31276 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
HOXC13P31276 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC13P31276 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HOXC13P31276 RPL23AP57-201ENST00000332361 466 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC13P31276 FRG1CP-201ENST00000358464 769 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 RNU6-1214P-201ENST00000363650 109 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 MIR1284-201ENST00000408337 120 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC13P31276 TPMTP2-201ENST00000414372 726 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC13P31276 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC13P31276 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.61□□□□□ -1.83
HOXC13P31276 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC13P31276 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC13P31276 AC093392.2-201ENST00000450682 337 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC13P31276 RPL31P3-201ENST00000458430 332 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 RPS3AP43-201ENST00000479743 781 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC13P31276 OR5BM1P-201ENST00000512021 366 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 AC008549.1-201ENST00000512900 643 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 SNORA3.4-201ENST00000515969 96 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.61□□□□□ -1.83
HOXC13P31276 AC103783.1-201ENST00000520506 373 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.61□□□□□ -1.83
HOXC13P31276 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC13P31276 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC13P31276 AC011611.1-201ENST00000552179 197 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 NBEAP1-201ENST00000554452 979 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 EIF4BP1-201ENST00000554881 351 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC13P31276 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC13P31276 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC13P31276 RBM11P1-201ENST00000604951 799 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 AC239868.4-201ENST00000608318 671 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 AC103591.3-201ENST00000608684 209 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 AC092106.3-201ENST00000611308 722 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC13P31276 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC13P31276 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.61□□□□□ -1.83
HOXC13P31276 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC13P31276 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC13P31276 SRP72P2-201ENST00000344851 1979 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 AC058791.1-201ENST00000608412 3198 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC13P31276 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HOXC13P31276 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC13P31276 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HOXC13P31276 RNU4-75P-201ENST00000364621 146 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC13P31276 RNU6-1242P-201ENST00000391052 103 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 AF274854.1-201ENST00000413236 615 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 ATG3P1-201ENST00000419507 911 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.6□□□□□ -1.83
HOXC13P31276 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC13P31276 AL390023.1-201ENST00000428836 262 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC13P31276 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXC13P31276 Z75741.1-201ENST00000446793 314 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 AL592447.1-201ENST00000447592 540 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.6□□□□□ -1.83
HOXC13P31276 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC13P31276 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXC13P31276 RPS4XP2-201ENST00000458402 793 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 UBE2DNL-203ENST00000474922 222 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 FCF1P3-201ENST00000496394 590 ntBASIC3.6□□□□□ -1.83
HOXC13P31276 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.6□□□□□ -1.83
HOXC13P31276 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms