Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 MIR4504-201ENST00000577413 92 ntBASIC4.95□□□□□ -1.62
COL8A1P27658 MIR5692A1-201ENST00000580523 69 ntBASIC4.95□□□□□ -1.62
COL8A1P27658 U1.34-201ENST00000618578 162 ntBASIC4.95□□□□□ -1.62
COL8A1P27658 Y_RNA.778-201ENST00000620203 90 ntBASIC4.95□□□□□ -1.62
COL8A1P27658 CR392039.4-201ENST00000624968 501 ntBASIC4.95□□□□□ -1.62
COL8A1P27658 IGHVIII-44-202ENST00000636235 289 ntBASIC4.95□□□□□ -1.62
COL8A1P27658 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL8A1P27658 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
COL8A1P27658 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COL8A1P27658 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL8A1P27658 AC009229.4-201ENST00000623854 1947 ntBASIC4.95□□□□□ -1.62
COL8A1P27658 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL8A1P27658 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
COL8A1P27658 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL8A1P27658 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC4.95□□□□□ -1.62
COL8A1P27658 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL8A1P27658 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL8A1P27658 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A1P27658 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.94□□□□□ -1.62
COL8A1P27658 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
COL8A1P27658 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
COL8A1P27658 AC087516.1-201ENST00000561236 2428 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 MFSD8-219ENST00000641228 2559 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 AL137141.1-201ENST00000624622 4836 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A1P27658 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
COL8A1P27658 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A1P27658 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.94□□□□□ -1.62
COL8A1P27658 RNA5SP335-201ENST00000363817 110 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 RNU1-32P-201ENST00000363937 159 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 SNORA62-201ENST00000365493 153 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.94□□□□□ -1.62
COL8A1P27658 Y_RNA.569-201ENST00000384749 103 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A1P27658 GLULP6-201ENST00000399502 913 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 HSPA8P15-201ENST00000401676 786 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 AC069218.2-201ENST00000411665 344 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 AC092809.3-201ENST00000415453 231 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 RPS23P10-201ENST00000416185 486 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.94□□□□□ -1.62
COL8A1P27658 AC108075.1-201ENST00000424692 529 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A1P27658 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.94□□□□□ -1.62
COL8A1P27658 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A1P27658 RN7SKP210-201ENST00000459176 261 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 AC010326.1-201ENST00000462726 602 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 AC008481.1-201ENST00000463278 396 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 AC005840.1-201ENST00000498412 377 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.94□□□□□ -1.62
COL8A1P27658 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.94□□□□□ -1.62
COL8A1P27658 AC074255.1-201ENST00000511259 501 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.94□□□□□ -1.62
COL8A1P27658 CASP1P1-201ENST00000526345 212 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.94□□□□□ -1.62
COL8A1P27658 FKBP1BP1-201ENST00000553366 325 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.94□□□□□ -1.62
COL8A1P27658 MIR4659A-201ENST00000580269 81 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 AC209154.1-201ENST00000582156 337 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 MIR4420-201ENST00000583944 77 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 AC008785.1-201ENST00000624475 456 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.94□□□□□ -1.62
COL8A1P27658 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.94□□□□□ -1.62
COL8A1P27658 AC110774.1-201ENST00000623567 2018 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A1P27658 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
COL8A1P27658 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A1P27658 MSL3P1-202ENST00000440028 1468 ntBASIC4.94□□□□□ -1.62
COL8A1P27658 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A1P27658 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A1P27658 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
COL8A1P27658 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A1P27658 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A1P27658 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
COL8A1P27658 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A1P27658 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.93□□□□□ -1.62
COL8A1P27658 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.93□□□□□ -1.62
COL8A1P27658 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC4.93□□□□□ -1.62
COL8A1P27658 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A1P27658 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A1P27658 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL8A1P27658 RNA5SP123-201ENST00000363244 119 ntBASIC4.93□□□□□ -1.62
COL8A1P27658 RNU1-59P-201ENST00000364829 162 ntBASIC4.93□□□□□ -1.62
COL8A1P27658 RNU6-514P-201ENST00000384208 107 ntBASIC4.93□□□□□ -1.62
COL8A1P27658 HSPE1P8-201ENST00000406997 288 ntBASIC4.93□□□□□ -1.62
COL8A1P27658 AC079809.1-201ENST00000415468 276 ntBASIC4.93□□□□□ -1.62
COL8A1P27658 RPL21P90-201ENST00000415692 466 ntBASIC4.93□□□□□ -1.62
COL8A1P27658 RPL26P6-201ENST00000440913 438 ntBASIC4.93□□□□□ -1.62
COL8A1P27658 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.93□□□□□ -1.62
COL8A1P27658 RNU6-1037P-201ENST00000459571 107 ntBASIC4.93□□□□□ -1.62
COL8A1P27658 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A1P27658 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.93□□□□□ -1.62
COL8A1P27658 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.93□□□□□ -1.62
COL8A1P27658 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.93□□□□□ -1.62
COL8A1P27658 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.93□□□□□ -1.62
COL8A1P27658 TGIF1P1-201ENST00000558095 802 ntBASIC4.93□□□□□ -1.62
COL8A1P27658 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.93□□□□□ -1.62
COL8A1P27658 ATP5J2P6-201ENST00000565203 266 ntBASIC4.93□□□□□ -1.62
COL8A1P27658 AC009127.3-201ENST00000570531 403 ntBASIC4.93□□□□□ -1.62
COL8A1P27658 MIR3613-201ENST00000579844 87 ntBASIC4.93□□□□□ -1.62
COL8A1P27658 PRPF19P1-201ENST00000584766 898 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms