Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 IQCB2P-201ENST00000401788 1633 ntBASIC5.69□□□□□ -1.5
VARSP26640 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VARSP26640 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.69□□□□□ -1.5
VARSP26640 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VARSP26640 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VARSP26640 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.68□□□□□ -1.5
VARSP26640 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VARSP26640 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VARSP26640 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VARSP26640 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.68□□□□□ -1.5
VARSP26640 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.68□□□□□ -1.5
VARSP26640 AP001029.2-203ENST00000589795 4910 ntBASIC5.68□□□□□ -1.5
VARSP26640 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.68□□□□□ -1.5
VARSP26640 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.68□□□□□ -1.5
VARSP26640 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
VARSP26640 MIR190B-201ENST00000401119 79 ntBASIC5.68□□□□□ -1.5
VARSP26640 AC063979.1-201ENST00000415539 377 ntBASIC5.68□□□□□ -1.5
VARSP26640 RPL12P46-201ENST00000436610 195 ntBASIC5.68□□□□□ -1.5
VARSP26640 RPL23AP81-201ENST00000455252 467 ntBASIC5.68□□□□□ -1.5
VARSP26640 AC023141.9-201ENST00000458734 412 ntBASIC5.68□□□□□ -1.5
VARSP26640 HMGB1P25-201ENST00000468402 607 ntBASIC5.68□□□□□ -1.5
VARSP26640 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.68□□□□□ -1.5
VARSP26640 AL049830.2-201ENST00000480072 201 ntBASIC5.68□□□□□ -1.5
VARSP26640 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.68□□□□□ -1.5
VARSP26640 RN7SKP258-201ENST00000517151 304 ntBASIC5.68□□□□□ -1.5
VARSP26640 AL590705.4-201ENST00000532209 134 ntBASIC5.68□□□□□ -1.5
VARSP26640 MRPS18CP4-201ENST00000535821 231 ntBASIC5.68□□□□□ -1.5
VARSP26640 AC126615.2-201ENST00000553003 515 ntBASIC5.68□□□□□ -1.5
VARSP26640 RPL21P7-201ENST00000557463 483 ntBASIC5.68□□□□□ -1.5
VARSP26640 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.68□□□□□ -1.5
VARSP26640 AC120057.2-201ENST00000571520 271 ntBASIC5.68□□□□□ -1.5
VARSP26640 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
VARSP26640 MIR3176-201ENST00000582210 90 ntBASIC5.68□□□□□ -1.5
VARSP26640 AC097372.5-201ENST00000623665 376 ntBASIC5.68□□□□□ -1.5
VARSP26640 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VARSP26640 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VARSP26640 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
VARSP26640 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VARSP26640 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VARSP26640 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VARSP26640 Y_RNA.240-201ENST00000364469 95 ntBASIC5.67□□□□□ -1.5
VARSP26640 RNY3P4-201ENST00000384428 101 ntBASIC5.67□□□□□ -1.5
VARSP26640 ENSAP1-201ENST00000392855 326 ntBASIC5.67□□□□□ -1.5
VARSP26640 MTCYBP2-201ENST00000407745 171 ntBASIC5.67□□□□□ -1.5
VARSP26640 AL353621.1-201ENST00000418219 243 ntBASIC5.67□□□□□ -1.5
VARSP26640 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.67□□□□□ -1.5
VARSP26640 AL031659.1-201ENST00000447075 539 ntBASIC5.67□□□□□ -1.5
VARSP26640 PRDX3P3-201ENST00000447765 522 ntBASIC5.67□□□□□ -1.5
VARSP26640 AP006222.1-205ENST00000450734 457 ntBASIC5.67□□□□□ -1.5
VARSP26640 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.67□□□□□ -1.5
VARSP26640 GEMIN2P1-201ENST00000454246 752 ntBASIC5.67□□□□□ -1.5
VARSP26640 RPL12P39-201ENST00000455456 496 ntBASIC5.67□□□□□ -1.5
VARSP26640 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.67□□□□□ -1.5
VARSP26640 AL122020.1-201ENST00000472287 459 ntBASIC5.67□□□□□ -1.5
VARSP26640 AC022133.1-201ENST00000490961 571 ntBASIC5.67□□□□□ -1.5
VARSP26640 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VARSP26640 RN7SL193P-201ENST00000491708 276 ntBASIC5.67□□□□□ -1.5
VARSP26640 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.67□□□□□ -1.5
VARSP26640 AC023824.2-201ENST00000566185 400 ntBASIC5.67□□□□□ -1.5
VARSP26640 MIR4776-2-201ENST00000580204 80 ntBASIC5.67□□□□□ -1.5
VARSP26640 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.67□□□□□ -1.5
VARSP26640 BDH2P1-201ENST00000602288 736 ntBASIC5.67□□□□□ -1.5
VARSP26640 AL133481.2-203ENST00000607558 139 ntBASIC5.67□□□□□ -1.5
VARSP26640 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.67□□□□□ -1.5
VARSP26640 AC079776.5-201ENST00000641920 211 ntBASIC5.67□□□□□ -1.5
VARSP26640 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
VARSP26640 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.67□□□□□ -1.5
VARSP26640 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VARSP26640 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.67□□□□□ -1.5
VARSP26640 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VARSP26640 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VARSP26640 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
VARSP26640 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
VARSP26640 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VARSP26640 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VARSP26640 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VARSP26640 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VARSP26640 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
VARSP26640 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VARSP26640 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
VARSP26640 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
VARSP26640 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
VARSP26640 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
VARSP26640 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VARSP26640 Y_RNA.233-201ENST00000364407 101 ntBASIC5.66□□□□□ -1.5
VARSP26640 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VARSP26640 RNU6-1179P-201ENST00000384667 107 ntBASIC5.66□□□□□ -1.5
VARSP26640 RNU6-417P-201ENST00000384712 107 ntBASIC5.66□□□□□ -1.5
VARSP26640 AC079809.1-201ENST00000415468 276 ntBASIC5.66□□□□□ -1.5
VARSP26640 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.66□□□□□ -1.5
VARSP26640 AL391219.1-201ENST00000422570 483 ntBASIC5.66□□□□□ -1.5
VARSP26640 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.66□□□□□ -1.5
VARSP26640 HMGB1P27-201ENST00000431429 603 ntBASIC5.66□□□□□ -1.5
VARSP26640 AC093414.1-201ENST00000434712 514 ntBASIC5.66□□□□□ -1.5
VARSP26640 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.66□□□□□ -1.5
VARSP26640 RANP8-201ENST00000444720 713 ntBASIC5.66□□□□□ -1.5
VARSP26640 NUTF2P3-201ENST00000448540 384 ntBASIC5.66□□□□□ -1.5
VARSP26640 AL591623.2-201ENST00000449978 222 ntBASIC5.66□□□□□ -1.5
VARSP26640 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.66□□□□□ -1.5
VARSP26640 RPS27AP13-201ENST00000498403 237 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms