Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RNA5SP372-201ENST00000390836 115 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 RNU6-754P-201ENST00000391166 107 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AL109755.1-201ENST00000401791 649 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 HDGFP1-201ENST00000405943 252 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 MIR1911-201ENST00000410783 80 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.58□□□□□ -1.68
PTPN1P18031 AL391219.1-201ENST00000422570 483 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AC018644.1-201ENST00000429934 551 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN1P18031 ELOCP18-201ENST00000434209 337 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 RPL36AP6-201ENST00000435770 321 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.58□□□□□ -1.68
PTPN1P18031 NUTF2P3-201ENST00000448540 384 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.58□□□□□ -1.68
PTPN1P18031 AC009963.2-201ENST00000453431 138 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN1P18031 PPP1R2P5-201ENST00000457256 603 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AC012158.1-204ENST00000483430 465 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AC105137.1-201ENST00000484355 562 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 RN7SL691P-201ENST00000494487 301 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AC008958.1-201ENST00000511047 682 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.58□□□□□ -1.68
PTPN1P18031 RN7SKP116-201ENST00000516902 319 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.58□□□□□ -1.68
PTPN1P18031 CYCSP29-201ENST00000533731 318 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 DYNLL1P4-201ENST00000549314 266 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 PARP1P2-201ENST00000556806 195 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AC026464.5-201ENST00000562497 722 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AL669831.4-202ENST00000590817 238 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN1P18031 AC113139.1-201ENST00000605049 239 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 MIR6716-201ENST00000613413 80 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AL445567.2-201ENST00000618935 498 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 uc_338.11-201ENST00000619132 160 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AC007546.1-201ENST00000619452 559 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.58□□□□□ -1.68
PTPN1P18031 C2orf27A-204ENST00000623058 969 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN1P18031 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PTPN1P18031 U6.114-201ENST00000636407 96 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
PTPN1P18031 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PTPN1P18031 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN1P18031 AC244517.1-201ENST00000606030 2086 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 ZNF33CP-201ENST00000432492 2030 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PTPN1P18031 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.58□□□□□ -1.68
PTPN1P18031 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN1P18031 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.58□□□□□ -1.68
PTPN1P18031 AC090971.4-201ENST00000560291 1800 ntBASIC4.58□□□□□ -1.68
PTPN1P18031 AL645937.1-201ENST00000641739 1652 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PTPN1P18031 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PTPN1P18031 AP004289.2-201ENST00000444413 1457 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PTPN1P18031 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PTPN1P18031 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PTPN1P18031 BDP1P-201ENST00000582658 1990 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 ASNSP1-201ENST00000518311 1939 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PTPN1P18031 RNA5SP28-201ENST00000363841 119 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 SNORA70.2-201ENST00000364506 135 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 RNA5SP22-201ENST00000365393 109 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 Y_RNA.384-201ENST00000383909 102 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 Y_RNA.474-201ENST00000384341 102 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 RNU6-831P-201ENST00000384548 107 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 AL590004.1-201ENST00000405321 300 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.57□□□□□ -1.68
PTPN1P18031 RNA5SP36-201ENST00000410197 133 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 RN7SKP159-201ENST00000410657 292 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.57□□□□□ -1.68
PTPN1P18031 AC009237.10-201ENST00000414112 510 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 AL451054.2-201ENST00000420896 202 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 HSPE1P1-201ENST00000421494 318 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 AC005517.2-201ENST00000424673 553 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 MTCO2P12-201ENST00000427426 682 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 PPIAP3-201ENST00000450588 505 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 AL118520.1-201ENST00000450770 291 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 AC007967.1-201ENST00000455422 1159 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 AL162395.1-201ENST00000457882 422 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 SNORD97-201ENST00000459187 142 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 AC079804.1-201ENST00000461922 436 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 UQCRHP4-201ENST00000471686 272 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PTPN1P18031 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.57□□□□□ -1.68
PTPN1P18031 RPL7P20-201ENST00000520308 745 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.57□□□□□ -1.68
PTPN1P18031 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.57□□□□□ -1.68
PTPN1P18031 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.57□□□□□ -1.68
PTPN1P18031 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.57□□□□□ -1.68
PTPN1P18031 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.57□□□□□ -1.68
PTPN1P18031 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.57□□□□□ -1.68
PTPN1P18031 MIR4424-201ENST00000585257 86 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PTPN1P18031 AC012443.1-201ENST00000605605 231 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.57□□□□□ -1.68
PTPN1P18031 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 AP001486.3-201ENST00000615334 372 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 LINC00901.1-201ENST00000617252 152 ntBASIC4.57□□□□□ -1.68
PTPN1P18031 AL445363.3-201ENST00000623080 671 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms