Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.88□□□□□ -1.63
ITGA4P13612 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.88□□□□□ -1.63
ITGA4P13612 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.88□□□□□ -1.63
ITGA4P13612 AC004801.2-202ENST00000463559 283 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 VN1R17P-201ENST00000472048 1090 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 AC103987.1-201ENST00000473394 348 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.88□□□□□ -1.63
ITGA4P13612 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.88□□□□□ -1.63
ITGA4P13612 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.88□□□□□ -1.63
ITGA4P13612 AC108078.2-201ENST00000510750 236 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.88□□□□□ -1.63
ITGA4P13612 RNU6-1170P-201ENST00000515974 106 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 Y_RNA.682-201ENST00000516457 100 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.88□□□□□ -1.63
ITGA4P13612 TOMM20P2-201ENST00000540082 421 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.88□□□□□ -1.63
ITGA4P13612 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.88□□□□□ -1.63
ITGA4P13612 MIR3939-201ENST00000582614 106 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 AC006254.3-201ENST00000603353 884 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 AP001330.4-201ENST00000604350 154 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 APOOP1-201ENST00000604695 592 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 AL008729.2-201ENST00000606393 473 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 MIR6716-201ENST00000613413 80 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 AC114781.5-201ENST00000615297 108 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 AC055839.1-201ENST00000634467 498 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.88□□□□□ -1.63
ITGA4P13612 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ITGA4P13612 GABPAP-201ENST00000419271 1356 ntBASIC4.88□□□□□ -1.63
ITGA4P13612 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
ITGA4P13612 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
ITGA4P13612 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.88□□□□□ -1.63
ITGA4P13612 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ITGA4P13612 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ITGA4P13612 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
ITGA4P13612 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ITGA4P13612 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.87□□□□□ -1.63
ITGA4P13612 MAPK10-303ENST00000641324 3959 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ITGA4P13612 MIR369-201ENST00000362155 70 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 RNU6-1284P-201ENST00000363701 100 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 SNORD116-29-201ENST00000384516 83 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 HDGFP1-201ENST00000405943 252 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 RNU4-14P-201ENST00000410858 122 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 AC011933.1-201ENST00000413334 321 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.87□□□□□ -1.63
ITGA4P13612 AC005517.2-201ENST00000424673 553 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 RPL7P46-201ENST00000425129 740 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 ELOCP18-201ENST00000434209 337 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 KCTD9P3-201ENST00000434597 1169 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 GTF2IP13-201ENST00000438487 386 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 Y_RNA.635-201ENST00000459041 101 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 AC116533.1-201ENST00000459748 321 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 RN7SL98P-201ENST00000462271 300 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 FTH1P2-201ENST00000466086 412 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 RPS27AP1-201ENST00000475545 471 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 AC012181.1-201ENST00000479895 423 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 AC106872.2-201ENST00000494303 480 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.87□□□□□ -1.63
ITGA4P13612 SNORD116-26-201ENST00000516006 96 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 RNU6-1088P-201ENST00000516850 104 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.87□□□□□ -1.63
ITGA4P13612 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.87□□□□□ -1.63
ITGA4P13612 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.87□□□□□ -1.63
ITGA4P13612 AP000763.2-201ENST00000540641 163 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.87□□□□□ -1.63
ITGA4P13612 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.87□□□□□ -1.63
ITGA4P13612 MIR3171-201ENST00000584270 74 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 MIR3138-201ENST00000585238 82 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ITGA4P13612 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.87□□□□□ -1.63
ITGA4P13612 AL627309.6-201ENST00000606857 840 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.87□□□□□ -1.63
ITGA4P13612 AL359757.2-201ENST00000624309 274 ntBASIC4.87□□□□□ -1.63
ITGA4P13612 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.87□□□□□ -1.63
ITGA4P13612 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ITGA4P13612 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
ITGA4P13612 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ITGA4P13612 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ITGA4P13612 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.87□□□□□ -1.63
ITGA4P13612 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
ITGA4P13612 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ITGA4P13612 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ITGA4P13612 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.86□□□□□ -1.63
ITGA4P13612 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ITGA4P13612 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
ITGA4P13612 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.86□□□□□ -1.63
ITGA4P13612 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.86□□□□□ -1.63
ITGA4P13612 OR5P1P-201ENST00000299512 925 ntBASIC4.86□□□□□ -1.63
ITGA4P13612 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ITGA4P13612 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ITGA4P13612 RNU6-1252P-201ENST00000363054 104 ntBASIC4.86□□□□□ -1.63
ITGA4P13612 SNORD42.2-201ENST00000365570 69 ntBASIC4.86□□□□□ -1.63
ITGA4P13612 SNORA75.4-201ENST00000391278 119 ntBASIC4.86□□□□□ -1.63
ITGA4P13612 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
ITGA4P13612 MIR548F5-201ENST00000408421 86 ntBASIC4.86□□□□□ -1.63
ITGA4P13612 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.86□□□□□ -1.63
ITGA4P13612 BEND7P1-201ENST00000422058 457 ntBASIC4.86□□□□□ -1.63
ITGA4P13612 RPS3AP52-201ENST00000435639 297 ntBASIC4.86□□□□□ -1.63
ITGA4P13612 Y_RNA.718-201ENST00000517110 102 ntBASIC4.86□□□□□ -1.63
ITGA4P13612 AC100870.1-201ENST00000522035 505 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms