Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.5□□□□□ -2.01
CFTRP13569 AL353898.1-201ENST00000444055 238 ntBASIC2.5□□□□□ -2.01
CFTRP13569 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CFTRP13569 SYF2P1-201ENST00000550658 413 ntBASIC2.5□□□□□ -2.01
CFTRP13569 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.5□□□□□ -2.01
CFTRP13569 MIR3199-1-201ENST00000582434 88 ntBASIC2.5□□□□□ -2.01
CFTRP13569 MIR6779-201ENST00000617283 64 ntBASIC2.5□□□□□ -2.01
CFTRP13569 STMN1P1-201ENST00000617809 440 ntBASIC2.5□□□□□ -2.01
CFTRP13569 AP003072.4-201ENST00000624580 310 ntBASIC2.5□□□□□ -2.01
CFTRP13569 AL121594.5-201ENST00000631724 573 ntBASIC2.5□□□□□ -2.01
CFTRP13569 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CFTRP13569 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CFTRP13569 AL157700.1-201ENST00000561973 1432 ntBASIC2.49□□□□□ -2.01
CFTRP13569 HMGN2P19-201ENST00000425149 265 ntBASIC2.49□□□□□ -2.01
CFTRP13569 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.49□□□□□ -2.01
CFTRP13569 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.49□□□□□ -2.01
CFTRP13569 AC004223.1-201ENST00000479840 271 ntBASIC2.49□□□□□ -2.01
CFTRP13569 AC034222.1-201ENST00000494052 532 ntBASIC2.49□□□□□ -2.01
CFTRP13569 SETP2-201ENST00000553886 926 ntBASIC2.49□□□□□ -2.01
CFTRP13569 AC024614.2-201ENST00000577584 372 ntBASIC2.49□□□□□ -2.01
CFTRP13569 AC010809.3-201ENST00000621310 641 ntBASIC2.49□□□□□ -2.01
CFTRP13569 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.49□□□□□ -2.01
CFTRP13569 OR4G11P-202ENST00000642116 1414 ntBASIC2.48□□□□□ -2.01
CFTRP13569 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CFTRP13569 AL596028.1-201ENST00000326971 197 ntBASIC2.48□□□□□ -2.01
CFTRP13569 RPL23AP47-201ENST00000408017 460 ntBASIC2.48□□□□□ -2.01
CFTRP13569 RPL31P2-201ENST00000413849 377 ntBASIC2.48□□□□□ -2.01
CFTRP13569 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.48□□□□□ -2.01
CFTRP13569 AL445669.1-201ENST00000426743 755 ntBASIC2.48□□□□□ -2.01
CFTRP13569 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.48□□□□□ -2.01
CFTRP13569 IGKV2D-36-201ENST00000518643 226 ntBASIC2.48□□□□□ -2.01
CFTRP13569 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.48□□□□□ -2.01
CFTRP13569 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.48□□□□□ -2.01
CFTRP13569 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CFTRP13569 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CFTRP13569 U8.1-201ENST00000362843 134 ntBASIC2.47□□□□□ -2.01
CFTRP13569 RNY1-201ENST00000364228 113 ntBASIC2.47□□□□□ -2.01
CFTRP13569 AC023128.2-201ENST00000420880 1223 ntBASIC2.47□□□□□ -2.01
CFTRP13569 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.47□□□□□ -2.01
CFTRP13569 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CFTRP13569 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.47□□□□□ -2.01
CFTRP13569 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CFTRP13569 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.47□□□□□ -2.01
CFTRP13569 MTATP6P22-201ENST00000507369 598 ntBASIC2.47□□□□□ -2.01
CFTRP13569 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CFTRP13569 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.47□□□□□ -2.01
CFTRP13569 AC019131.2-201ENST00000609071 870 ntBASIC2.47□□□□□ -2.01
CFTRP13569 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.47□□□□□ -2.01
CFTRP13569 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
CFTRP13569 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.46□□□□□ -2.02
CFTRP13569 SNORD114-26-201ENST00000363543 72 ntBASIC2.46□□□□□ -2.02
CFTRP13569 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.46□□□□□ -2.02
CFTRP13569 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.46□□□□□ -2.02
CFTRP13569 RPS15AP17-201ENST00000470598 390 ntBASIC2.46□□□□□ -2.02
CFTRP13569 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.46□□□□□ -2.02
CFTRP13569 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.46□□□□□ -2.02
CFTRP13569 AC006065.5-201ENST00000623427 349 ntBASIC2.46□□□□□ -2.02
CFTRP13569 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.46□□□□□ -2.02
CFTRP13569 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CFTRP13569 RNU4-51P-201ENST00000364206 140 ntBASIC2.45□□□□□ -2.02
CFTRP13569 MT-TP-201ENST00000387461 68 ntBASIC2.45□□□□□ -2.02
CFTRP13569 AL365400.1-201ENST00000431854 640 ntBASIC2.45□□□□□ -2.02
CFTRP13569 MTCYBP18-201ENST00000501056 747 ntBASIC2.45□□□□□ -2.02
CFTRP13569 MIR4474-201ENST00000579189 78 ntBASIC2.45□□□□□ -2.02
CFTRP13569 AC015849.6-201ENST00000605454 474 ntBASIC2.45□□□□□ -2.02
CFTRP13569 AC006023.2-201ENST00000609916 167 ntBASIC2.45□□□□□ -2.02
CFTRP13569 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
CFTRP13569 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CFTRP13569 NUP58P1-201ENST00000502546 1738 ntBASIC2.45□□□□□ -2.02
CFTRP13569 MIR613-201ENST00000385248 95 ntBASIC2.45□□□□□ -2.02
CFTRP13569 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.45□□□□□ -2.02
CFTRP13569 HMGB1P45-201ENST00000435986 653 ntBASIC2.45□□□□□ -2.02
CFTRP13569 HMGN2P20-201ENST00000437531 273 ntBASIC2.45□□□□□ -2.02
CFTRP13569 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.45□□□□□ -2.02
CFTRP13569 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.45□□□□□ -2.02
CFTRP13569 RPS15AP1-201ENST00000457423 391 ntBASIC2.45□□□□□ -2.02
CFTRP13569 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CFTRP13569 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.45□□□□□ -2.02
CFTRP13569 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.45□□□□□ -2.02
CFTRP13569 AC084364.2-201ENST00000546924 395 ntBASIC2.45□□□□□ -2.02
CFTRP13569 PSMA3P-201ENST00000555485 635 ntBASIC2.45□□□□□ -2.02
CFTRP13569 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
CFTRP13569 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.44□□□□□ -2.02
CFTRP13569 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.44□□□□□ -2.02
CFTRP13569 RNU6-1-201ENST00000383898 107 ntBASIC2.44□□□□□ -2.02
CFTRP13569 RNU6-42P-201ENST00000384165 107 ntBASIC2.44□□□□□ -2.02
CFTRP13569 RNU6-36P-201ENST00000384172 107 ntBASIC2.44□□□□□ -2.02
CFTRP13569 RNU6-4P-201ENST00000384205 107 ntBASIC2.44□□□□□ -2.02
CFTRP13569 RNU6-5P-201ENST00000384238 107 ntBASIC2.44□□□□□ -2.02
CFTRP13569 RNU6-3P-201ENST00000384314 107 ntBASIC2.44□□□□□ -2.02
CFTRP13569 RNU6-2-201ENST00000384627 107 ntBASIC2.44□□□□□ -2.02
CFTRP13569 RNU6-9-201ENST00000384776 107 ntBASIC2.44□□□□□ -2.02
CFTRP13569 RNU6-33P-201ENST00000384793 107 ntBASIC2.44□□□□□ -2.02
CFTRP13569 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.44□□□□□ -2.02
CFTRP13569 COX6CP12-201ENST00000446748 202 ntBASIC2.44□□□□□ -2.02
CFTRP13569 RPL21P39-201ENST00000463605 483 ntBASIC2.44□□□□□ -2.02
CFTRP13569 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.44□□□□□ -2.02
CFTRP13569 AC011979.1-201ENST00000472300 483 ntBASIC2.44□□□□□ -2.02
CFTRP13569 RPL21P93-201ENST00000480465 489 ntBASIC2.44□□□□□ -2.02
CFTRP13569 AC233702.1-201ENST00000482905 502 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms