Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.63□□□□□ -1.83
PCNAP12004 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.63□□□□□ -1.83
PCNAP12004 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.63□□□□□ -1.83
PCNAP12004 AL022099.1-201ENST00000604551 712 ntBASIC3.63□□□□□ -1.83
PCNAP12004 NDUFA8P1-201ENST00000605525 367 ntBASIC3.63□□□□□ -1.83
PCNAP12004 AC091834.1-201ENST00000614543 472 ntBASIC3.63□□□□□ -1.83
PCNAP12004 AL450472.3-201ENST00000615578 367 ntBASIC3.63□□□□□ -1.83
PCNAP12004 AC079684.1-201ENST00000621405 437 ntBASIC3.63□□□□□ -1.83
PCNAP12004 SNORA50A-202ENST00000629536 136 ntBASIC3.63□□□□□ -1.83
PCNAP12004 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.63□□□□□ -1.83
PCNAP12004 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCNAP12004 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCNAP12004 AC092447.7-201ENST00000422212 1621 ntBASIC3.62□□□□□ -1.83
PCNAP12004 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCNAP12004 AL138713.1-201ENST00000624026 2130 ntBASIC3.62□□□□□ -1.83
PCNAP12004 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCNAP12004 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PCNAP12004 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PCNAP12004 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PCNAP12004 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCNAP12004 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCNAP12004 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.62□□□□□ -1.83
PCNAP12004 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCNAP12004 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.62□□□□□ -1.83
PCNAP12004 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
PCNAP12004 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCNAP12004 Y_RNA.3-201ENST00000362331 103 ntBASIC3.62□□□□□ -1.83
PCNAP12004 MIR30B-201ENST00000384850 88 ntBASIC3.62□□□□□ -1.83
PCNAP12004 RNU6-882P-201ENST00000391025 103 ntBASIC3.62□□□□□ -1.83
PCNAP12004 PPIAP31-201ENST00000405422 495 ntBASIC3.62□□□□□ -1.83
PCNAP12004 RNU2-43P-201ENST00000410306 190 ntBASIC3.62□□□□□ -1.83
PCNAP12004 RNU6-516P-201ENST00000411381 104 ntBASIC3.62□□□□□ -1.83
PCNAP12004 RNU2-71P-201ENST00000411395 189 ntBASIC3.62□□□□□ -1.83
PCNAP12004 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.62□□□□□ -1.83
PCNAP12004 MTCO3P12-201ENST00000416718 547 ntBASIC3.62□□□□□ -1.83
PCNAP12004 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.62□□□□□ -1.83
PCNAP12004 RPS15AP12-201ENST00000419498 388 ntBASIC3.62□□□□□ -1.83
PCNAP12004 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.62□□□□□ -1.83
PCNAP12004 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.62□□□□□ -1.83
PCNAP12004 AL358934.1-201ENST00000432346 324 ntBASIC3.62□□□□□ -1.83
PCNAP12004 TIMM9P1-201ENST00000436122 256 ntBASIC3.62□□□□□ -1.83
PCNAP12004 AC073614.1-201ENST00000438690 650 ntBASIC3.62□□□□□ -1.83
PCNAP12004 RPS29P7-201ENST00000439662 171 ntBASIC3.62□□□□□ -1.83
PCNAP12004 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.62□□□□□ -1.83
PCNAP12004 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCNAP12004 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.62□□□□□ -1.83
PCNAP12004 UBDP1-202ENST00000457888 382 ntBASIC3.62□□□□□ -1.83
PCNAP12004 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.62□□□□□ -1.83
PCNAP12004 RPL7P23-201ENST00000493874 747 ntBASIC3.62□□□□□ -1.83
PCNAP12004 RN7SKP209-201ENST00000516888 304 ntBASIC3.62□□□□□ -1.83
PCNAP12004 RNU6-430P-201ENST00000517078 107 ntBASIC3.62□□□□□ -1.83
PCNAP12004 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.62□□□□□ -1.83
PCNAP12004 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.62□□□□□ -1.83
PCNAP12004 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.62□□□□□ -1.83
PCNAP12004 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.62□□□□□ -1.83
PCNAP12004 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.62□□□□□ -1.83
PCNAP12004 CYCSP30-201ENST00000546447 172 ntBASIC3.62□□□□□ -1.83
PCNAP12004 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.62□□□□□ -1.83
PCNAP12004 AL163153.1-201ENST00000554223 283 ntBASIC3.62□□□□□ -1.83
PCNAP12004 AL121576.1-201ENST00000556055 276 ntBASIC3.62□□□□□ -1.83
PCNAP12004 AC245505.1-201ENST00000556398 224 ntBASIC3.62□□□□□ -1.83
PCNAP12004 AL133153.1-201ENST00000557756 303 ntBASIC3.62□□□□□ -1.83
PCNAP12004 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.62□□□□□ -1.83
PCNAP12004 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.62□□□□□ -1.83
PCNAP12004 COX6CP3-201ENST00000580869 223 ntBASIC3.62□□□□□ -1.83
PCNAP12004 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.62□□□□□ -1.83
PCNAP12004 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.62□□□□□ -1.83
PCNAP12004 AL136363.2-201ENST00000604173 851 ntBASIC3.62□□□□□ -1.83
PCNAP12004 AL161729.4-201ENST00000604650 476 ntBASIC3.62□□□□□ -1.83
PCNAP12004 SNORA62.6-201ENST00000606322 83 ntBASIC3.62□□□□□ -1.83
PCNAP12004 AC013476.2-201ENST00000614456 459 ntBASIC3.62□□□□□ -1.83
PCNAP12004 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.62□□□□□ -1.83
PCNAP12004 AC015540.1-201ENST00000615828 501 ntBASIC3.62□□□□□ -1.83
PCNAP12004 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.62□□□□□ -1.83
PCNAP12004 AL354798.1-201ENST00000622505 329 ntBASIC3.62□□□□□ -1.83
PCNAP12004 MIR6810-201ENST00000622701 70 ntBASIC3.62□□□□□ -1.83
PCNAP12004 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.62□□□□□ -1.83
PCNAP12004 PISRT1-201ENST00000626175 531 ntBASIC3.62□□□□□ -1.83
PCNAP12004 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.62□□□□□ -1.83
PCNAP12004 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCNAP12004 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCNAP12004 AL365440.1-201ENST00000436135 2167 ntBASIC3.61□□□□□ -1.83
PCNAP12004 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCNAP12004 RNU5E-8P-201ENST00000363502 116 ntBASIC3.61□□□□□ -1.83
PCNAP12004 RNU4-1-201ENST00000363925 141 ntBASIC3.61□□□□□ -1.83
PCNAP12004 RNU5A-8P-201ENST00000364102 114 ntBASIC3.61□□□□□ -1.83
PCNAP12004 RN7SKP227-201ENST00000364445 330 ntBASIC3.61□□□□□ -1.83
PCNAP12004 RNU6-637P-201ENST00000384050 107 ntBASIC3.61□□□□□ -1.83
PCNAP12004 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PCNAP12004 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.61□□□□□ -1.83
PCNAP12004 CCDC58P2-201ENST00000417131 366 ntBASIC3.61□□□□□ -1.83
PCNAP12004 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.61□□□□□ -1.83
PCNAP12004 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.61□□□□□ -1.83
PCNAP12004 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.61□□□□□ -1.83
PCNAP12004 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.61□□□□□ -1.83
PCNAP12004 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.61□□□□□ -1.83
PCNAP12004 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.61□□□□□ -1.83
PCNAP12004 NUTF2P7-201ENST00000453086 375 ntBASIC3.61□□□□□ -1.83
PCNAP12004 HMGN2P16-201ENST00000456802 261 ntBASIC3.61□□□□□ -1.83
PCNAP12004 snoU13.24-201ENST00000458998 104 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms