Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL356320.2-201ENST00000417263 507 ntBASIC3.06□□□□□ -1.92
TOP1P11387 PTP4A1P7-201ENST00000423476 514 ntBASIC3.06□□□□□ -1.92
TOP1P11387 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AC004854.1-201ENST00000440356 349 ntBASIC3.06□□□□□ -1.92
TOP1P11387 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TOP1P11387 OR51B8P-201ENST00000449892 769 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.06□□□□□ -1.92
TOP1P11387 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.06□□□□□ -1.92
TOP1P11387 AC008571.1-201ENST00000467232 300 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AC104164.3-201ENST00000467363 1258 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.06□□□□□ -1.92
TOP1P11387 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.06□□□□□ -1.92
TOP1P11387 TPT1P8-201ENST00000510120 555 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AC110760.3-202ENST00000515177 371 ntBASIC3.06□□□□□ -1.92
TOP1P11387 RNU6-826P-201ENST00000516827 104 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AC103783.1-201ENST00000520506 373 ntBASIC3.06□□□□□ -1.92
TOP1P11387 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TOP1P11387 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.06□□□□□ -1.92
TOP1P11387 AP001317.1-201ENST00000531194 960 ntBASIC3.06□□□□□ -1.92
TOP1P11387 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.06□□□□□ -1.92
TOP1P11387 CYB5AP5-201ENST00000549779 389 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AC008127.2-201ENST00000549925 1075 ntBASIC3.06□□□□□ -1.92
TOP1P11387 SETP7-201ENST00000552169 453 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.06□□□□□ -1.92
TOP1P11387 AC008739.2-201ENST00000597006 317 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AL022067.1-201ENST00000602426 454 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AL391001.1-201ENST00000602747 715 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AP000526.1-201ENST00000603308 1388 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.06□□□□□ -1.92
TOP1P11387 AC022960.3-201ENST00000619794 441 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AL121594.5-201ENST00000631724 573 ntBASIC3.06□□□□□ -1.92
TOP1P11387 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TOP1P11387 TPTE2P4-201ENST00000258589 1605 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AP000568.1-201ENST00000282964 442 ntBASIC3.05□□□□□ -1.92
TOP1P11387 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
TOP1P11387 RNA5SP68-201ENST00000363885 119 ntBASIC3.05□□□□□ -1.92
TOP1P11387 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
TOP1P11387 RNU6-1197P-201ENST00000391183 107 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AL031679.1-201ENST00000400616 525 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AL603865.2-201ENST00000401679 213 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.05□□□□□ -1.92
TOP1P11387 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.05□□□□□ -1.92
TOP1P11387 MTCO2P23-201ENST00000425216 680 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.05□□□□□ -1.92
TOP1P11387 RPL23AP74-201ENST00000437246 471 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.05□□□□□ -1.92
TOP1P11387 AC011816.1-201ENST00000441346 546 ntBASIC3.05□□□□□ -1.92
TOP1P11387 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.05□□□□□ -1.92
TOP1P11387 RPS3P1-201ENST00000456781 192 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AC126389.1-201ENST00000477436 290 ntBASIC3.05□□□□□ -1.92
TOP1P11387 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.05□□□□□ -1.92
TOP1P11387 GTF2IP9-201ENST00000502460 301 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TOP1P11387 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.05□□□□□ -1.92
TOP1P11387 AL359273.1-201ENST00000510918 627 ntBASIC3.05□□□□□ -1.92
TOP1P11387 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.05□□□□□ -1.92
TOP1P11387 OR5AK1P-201ENST00000524837 922 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.05□□□□□ -1.92
TOP1P11387 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.05□□□□□ -1.92
TOP1P11387 AC128657.1-201ENST00000549459 145 ntBASIC3.05□□□□□ -1.92
TOP1P11387 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.05□□□□□ -1.92
TOP1P11387 HMGB1P14-201ENST00000557424 591 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.05□□□□□ -1.92
TOP1P11387 AC013444.2-201ENST00000603317 787 ntBASIC3.05□□□□□ -1.92
TOP1P11387 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.05□□□□□ -1.92
TOP1P11387 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.05□□□□□ -1.92
TOP1P11387 AP000254.1-201ENST00000609934 520 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AL050303.3-201ENST00000613704 284 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AL161629.2-201ENST00000615347 275 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AC068880.5-201ENST00000624331 290 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AC110079.1-202ENST00000635213 138 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AC099654.9-201ENST00000637055 678 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AC013437.2-201ENST00000639587 677 ntBASIC3.05□□□□□ -1.92
TOP1P11387 AC008669.1-201ENST00000565823 2178 ntBASIC3.05□□□□□ -1.92
TOP1P11387 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
TOP1P11387 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TOP1P11387 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.05□□□□□ -1.92
TOP1P11387 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
TOP1P11387 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.04□□□□□ -1.92
TOP1P11387 SNORD62.1-201ENST00000362541 86 ntBASIC3.04□□□□□ -1.92
TOP1P11387 RNU6-839P-201ENST00000363347 108 ntBASIC3.04□□□□□ -1.92
TOP1P11387 RNU6-353P-201ENST00000364266 108 ntBASIC3.04□□□□□ -1.92
TOP1P11387 MTND4P13-201ENST00000402078 1023 ntBASIC3.04□□□□□ -1.92
TOP1P11387 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.04□□□□□ -1.92
TOP1P11387 RAP1BP1-201ENST00000412709 553 ntBASIC3.04□□□□□ -1.92
TOP1P11387 AL513477.1-202ENST00000417061 214 ntBASIC3.04□□□□□ -1.92
TOP1P11387 BOLA3P4-201ENST00000418151 400 ntBASIC3.04□□□□□ -1.92
TOP1P11387 USP9YP21-201ENST00000420603 432 ntBASIC3.04□□□□□ -1.92
TOP1P11387 AL513175.2-201ENST00000422071 443 ntBASIC3.04□□□□□ -1.92
TOP1P11387 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.04□□□□□ -1.92
TOP1P11387 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.04□□□□□ -1.92
TOP1P11387 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.04□□□□□ -1.92
TOP1P11387 LSM1P1-201ENST00000438629 273 ntBASIC3.04□□□□□ -1.92
TOP1P11387 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.04□□□□□ -1.92
TOP1P11387 RAC1P7-201ENST00000445367 377 ntBASIC3.04□□□□□ -1.92
TOP1P11387 ST13P20-201ENST00000447996 1065 ntBASIC3.04□□□□□ -1.92
TOP1P11387 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.04□□□□□ -1.92
TOP1P11387 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.04□□□□□ -1.92
TOP1P11387 snoU109.3-201ENST00000459477 145 ntBASIC3.04□□□□□ -1.92
TOP1P11387 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms