Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 Y_RNA.378-201ENST00000365652 113 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 RNU6-1040P-201ENST00000383974 107 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 AC092447.6-201ENST00000414578 210 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 RPL7P10-201ENST00000417407 739 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 AC016696.1-201ENST00000446949 318 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 PTMAP3-201ENST00000447474 330 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 AC135721.1-201ENST00000497954 479 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 RNU6-64P-201ENST00000517119 105 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 FAM60DP-201ENST00000524174 632 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 AL592436.1-201ENST00000605135 558 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 PRR13P7-201ENST00000605538 430 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 AC078938.1-201ENST00000620993 318 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 ADAM24P-201ENST00000398655 2101 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 CDC27P3-201ENST00000635418 1910 ntBASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CSB-PGBD3P0DP91 PNPT1P2-201ENST00000456768 2050 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 EFTUD1P2-201ENST00000514817 1603 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 AC021146.4-201ENST00000309229 279 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 RNU6-637P-201ENST00000384050 107 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 Y_RNA.646-201ENST00000410980 101 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 GNG5P5-201ENST00000420444 220 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 RPL23AP38-201ENST00000423801 469 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 BX276092.6-201ENST00000430476 250 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 AC005019.1-201ENST00000436455 431 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 BX276092.8-201ENST00000455722 250 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 RPL36AP13-201ENST00000457490 317 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 RPL7P43-201ENST00000478876 753 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 AC068781.1-201ENST00000488231 618 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 AC116562.3-201ENST00000506136 177 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 Y_RNA.668-201ENST00000516233 93 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 RNA5SP454-201ENST00000517231 127 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 AC068587.5-201ENST00000528506 175 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 CYCSP29-201ENST00000533731 318 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 LSM3P2-201ENST00000551246 273 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 IPO5P1-202ENST00000600039 287 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 AC018889.1-201ENST00000605372 397 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 AC000374.1-201ENST00000434698 1745 ntBASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.22□□□□□ -1.41
CSB-PGBD3P0DP91 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.21□□□□□ -1.41
CSB-PGBD3P0DP91 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
CSB-PGBD3P0DP91 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.21□□□□□ -1.41
CSB-PGBD3P0DP91 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 MIR23B-201ENST00000384832 97 ntBASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 AL136372.1-201ENST00000403060 228 ntBASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 AL139397.2-201ENST00000404529 772 ntBASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 RNU6-954P-201ENST00000411355 107 ntBASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 RNA5SP107-201ENST00000411358 122 ntBASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 RPS29P17-201ENST00000430795 166 ntBASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 AC020550.1-201ENST00000447385 163 ntBASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 RNU7-180P-201ENST00000459240 63 ntBASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 HMGN1P28-201ENST00000521340 364 ntBASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 AC068446.3-201ENST00000555285 382 ntBASIC6.21□□□□□ -1.42
CSB-PGBD3P0DP91 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms