Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC079203.1-201ENST00000487972 404 ntBASIC1.95□□□□□ -2.1
COL4A1P02462 RPL21P16-201ENST00000495531 483 ntBASIC1.95□□□□□ -2.1
COL4A1P02462 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.95□□□□□ -2.1
COL4A1P02462 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.95□□□□□ -2.1
COL4A1P02462 RNA5SP490-201ENST00000517141 136 ntBASIC1.95□□□□□ -2.1
COL4A1P02462 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.95□□□□□ -2.1
COL4A1P02462 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.95□□□□□ -2.1
COL4A1P02462 AC023158.1-201ENST00000561632 1025 ntBASIC1.95□□□□□ -2.1
COL4A1P02462 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.95□□□□□ -2.1
COL4A1P02462 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
COL4A1P02462 ZNF92P3-201ENST00000596594 954 ntBASIC1.95□□□□□ -2.1
COL4A1P02462 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL4A1P02462 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.95□□□□□ -2.1
COL4A1P02462 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
COL4A1P02462 RNU6-582P-201ENST00000362989 107 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 RNU6-31P-201ENST00000384388 108 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 RNU1-57P-201ENST00000384491 166 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 CCNB2P1-201ENST00000399411 1150 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 USP9YP6-201ENST00000413550 854 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 MTCO3P4-201ENST00000419236 787 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 MTND4P24-201ENST00000424002 397 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 AC009965.2-201ENST00000425328 970 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 ELOCP6-201ENST00000429066 328 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A1P02462 MED6P1-201ENST00000439659 713 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A1P02462 UBE2V1P5-201ENST00000440070 405 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A1P02462 TPMTP4-201ENST00000450749 678 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 USP9YP34-201ENST00000453983 808 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 ELOCP12-201ENST00000458706 328 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 AC104472.2-201ENST00000469035 601 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 AC023050.1-201ENST00000498198 304 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A1P02462 AC109471.1-201ENST00000511631 612 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 TRMT112P2-201ENST00000512910 132 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 RNU6-1004P-201ENST00000516584 111 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A1P02462 AC026241.1-201ENST00000517873 2142 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 AC239860.2-201ENST00000525886 270 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.94□□□□□ -2.1
COL4A1P02462 AC025918.2-201ENST00000558683 763 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A1P02462 AC105429.2-201ENST00000610567 517 ntBASIC1.94□□□□□ -2.1
COL4A1P02462 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
COL4A1P02462 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
COL4A1P02462 RNU2-68P-201ENST00000410878 191 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 POLHP1-201ENST00000411806 470 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.93□□□□□ -2.1
COL4A1P02462 XKRYP4-201ENST00000414395 483 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 BX510359.4-201ENST00000423750 193 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 CR848007.2-201ENST00000424918 787 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 XKRYP5-201ENST00000449659 483 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.93□□□□□ -2.1
COL4A1P02462 SNORD121B-201ENST00000458838 81 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.93□□□□□ -2.1
COL4A1P02462 RPL21P103-201ENST00000479921 488 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 MTATP6P22-201ENST00000507369 598 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.93□□□□□ -2.1
COL4A1P02462 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A1P02462 HMGB1P46-201ENST00000520062 610 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 AC027104.1-201ENST00000563702 681 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.93□□□□□ -2.1
COL4A1P02462 AC100814.1-201ENST00000606963 623 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 AC012467.1-201ENST00000607740 256 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 RMST_6.1-201ENST00000611980 203 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 uc_338.9-201ENST00000617424 182 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 HPVC1-201ENST00000629899 1198 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
COL4A1P02462 METTL21EP-201ENST00000298105 713 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A1P02462 MIR1276-201ENST00000408707 83 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.93□□□□□ -2.1
COL4A1P02462 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.93□□□□□ -2.1
COL4A1P02462 RPL7P37-201ENST00000425095 738 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 RPS7P2-201ENST00000435134 607 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 SNRPFP4-201ENST00000456366 242 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.93□□□□□ -2.1
COL4A1P02462 AC108734.3-201ENST00000481241 1165 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.93□□□□□ -2.1
COL4A1P02462 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.93□□□□□ -2.1
COL4A1P02462 CIR1P1-201ENST00000524055 1133 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.93□□□□□ -2.1
COL4A1P02462 MIR4421-201ENST00000578133 69 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 RN7SL622P-201ENST00000585292 275 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 MIR6895-201ENST00000613497 78 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 AC121761.2-201ENST00000617300 689 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.93□□□□□ -2.1
COL4A1P02462 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.93□□□□□ -2.1
COL4A1P02462 RNF6P1-201ENST00000444889 1784 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL4A1P02462 MTND4P1-201ENST00000457501 1466 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 OR5T3-201ENST00000303059 1023 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 RNU1-101P-201ENST00000391171 127 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
COL4A1P02462 AC023128.2-201ENST00000420880 1223 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 RPL30P3-201ENST00000424262 333 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.92□□□□□ -2.1
COL4A1P02462 MTCYBP45-201ENST00000435243 565 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 ELOCP11-201ENST00000436690 332 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms