Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RPS3AP23-202ENST00000574601 686 ntBASIC4.26□□□□□ -1.73
COL3A1P02461 MIR4795-201ENST00000584182 89 ntBASIC4.26□□□□□ -1.73
COL3A1P02461 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.26□□□□□ -1.73
COL3A1P02461 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL3A1P02461 AC005332.6-201ENST00000613178 446 ntBASIC4.26□□□□□ -1.73
COL3A1P02461 AC008250.2-201ENST00000615261 205 ntBASIC4.26□□□□□ -1.73
COL3A1P02461 SCARNA15.3-201ENST00000626315 122 ntBASIC4.26□□□□□ -1.73
COL3A1P02461 SCARNA4.1-201ENST00000628597 123 ntBASIC4.26□□□□□ -1.73
COL3A1P02461 MIR1321-201ENST00000637766 79 ntBASIC4.26□□□□□ -1.73
COL3A1P02461 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL3A1P02461 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.26□□□□□ -1.73
COL3A1P02461 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL3A1P02461 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
COL3A1P02461 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.25□□□□□ -1.73
COL3A1P02461 Y_RNA.326-201ENST00000365176 113 ntBASIC4.25□□□□□ -1.73
COL3A1P02461 U3.19-201ENST00000390893 196 ntBASIC4.25□□□□□ -1.73
COL3A1P02461 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL3A1P02461 AL356776.1-201ENST00000406574 447 ntBASIC4.25□□□□□ -1.73
COL3A1P02461 RNU4-47P-201ENST00000410876 114 ntBASIC4.25□□□□□ -1.73
COL3A1P02461 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL3A1P02461 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.25□□□□□ -1.73
COL3A1P02461 FTLP19-201ENST00000433300 394 ntBASIC4.25□□□□□ -1.73
COL3A1P02461 HSPE1P22-201ENST00000456856 327 ntBASIC4.25□□□□□ -1.73
COL3A1P02461 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.25□□□□□ -1.73
COL3A1P02461 RNU6-1045P-201ENST00000516321 107 ntBASIC4.25□□□□□ -1.73
COL3A1P02461 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.25□□□□□ -1.73
COL3A1P02461 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.25□□□□□ -1.73
COL3A1P02461 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.25□□□□□ -1.73
COL3A1P02461 AL359212.1-201ENST00000556608 614 ntBASIC4.25□□□□□ -1.73
COL3A1P02461 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.25□□□□□ -1.73
COL3A1P02461 MIR4637-201ENST00000582405 84 ntBASIC4.25□□□□□ -1.73
COL3A1P02461 AC010928.3-201ENST00000587712 541 ntBASIC4.25□□□□□ -1.73
COL3A1P02461 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.25□□□□□ -1.73
COL3A1P02461 AC010200.2-201ENST00000605098 235 ntBASIC4.25□□□□□ -1.73
COL3A1P02461 AC092650.2-201ENST00000619984 902 ntBASIC4.25□□□□□ -1.73
COL3A1P02461 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.25□□□□□ -1.73
COL3A1P02461 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.25□□□□□ -1.73
COL3A1P02461 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL3A1P02461 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
COL3A1P02461 AC090229.1-201ENST00000590983 1609 ntBASIC4.25□□□□□ -1.73
COL3A1P02461 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COL3A1P02461 SNORD56.2-201ENST00000363242 71 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 MIR184-201ENST00000384962 84 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 RNU6-1300P-201ENST00000391046 108 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AC109780.2-201ENST00000413467 845 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.24□□□□□ -1.73
COL3A1P02461 AC127526.1-201ENST00000417526 366 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AL356583.2-201ENST00000426536 280 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.24□□□□□ -1.73
COL3A1P02461 AP000936.3-201ENST00000438127 255 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 HMGB3P11-201ENST00000440127 604 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.24□□□□□ -1.73
COL3A1P02461 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.24□□□□□ -1.73
COL3A1P02461 MTND6P5-201ENST00000448266 512 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.24□□□□□ -1.73
COL3A1P02461 MTCYBP43-201ENST00000513621 740 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 RNU6-1334P-201ENST00000516032 105 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 IGLVIV-53-201ENST00000520107 367 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.24□□□□□ -1.73
COL3A1P02461 AK6P1-201ENST00000540219 478 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 CBX3P5-201ENST00000552017 521 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AL121821.2-201ENST00000556081 394 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AL139286.1-201ENST00000604465 483 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AC007363.1-201ENST00000604736 620 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.24□□□□□ -1.73
COL3A1P02461 MIR3662-201ENST00000637030 95 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 CRYM-AS1-204ENST00000637983 556 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
COL3A1P02461 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL3A1P02461 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL3A1P02461 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL3A1P02461 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.24□□□□□ -1.73
COL3A1P02461 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.24□□□□□ -1.73
COL3A1P02461 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL3A1P02461 HSPA8P17-201ENST00000427029 1382 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.24□□□□□ -1.73
COL3A1P02461 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.24□□□□□ -1.73
COL3A1P02461 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL3A1P02461 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL3A1P02461 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COL3A1P02461 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.24□□□□□ -1.73
COL3A1P02461 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL3A1P02461 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.24□□□□□ -1.73
COL3A1P02461 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL3A1P02461 RNU5D-1-201ENST00000363299 116 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 Y_RNA.279-201ENST00000364763 95 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 RPS27AP14-201ENST00000422868 454 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AL451074.3-201ENST00000437709 472 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.24□□□□□ -1.73
COL3A1P02461 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.24□□□□□ -1.73
COL3A1P02461 RPS12P18-201ENST00000442381 270 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AC092757.1-201ENST00000467293 467 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AC087312.1-201ENST00000471411 480 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AC017015.1-201ENST00000477387 286 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.24□□□□□ -1.73
COL3A1P02461 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL3A1P02461 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.24□□□□□ -1.73
COL3A1P02461 AC105914.1-201ENST00000511798 226 ntBASIC4.24□□□□□ -1.73
COL3A1P02461 AC010493.1-201ENST00000513479 292 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms