Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 HSPE1P20-201ENST00000538133 289 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 NBEAP1-201ENST00000554452 979 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC090695.1-201ENST00000561269 1222 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC009712.1-201ENST00000564938 316 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 MIR3605-201ENST00000583214 100 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AL353997.4-201ENST00000586196 166 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC245884.10-201ENST00000597355 337 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC091057.2-201ENST00000602594 792 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC004987.4-201ENST00000603383 338 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 ELOCP35-201ENST00000604289 336 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC106791.2-201ENST00000604680 391 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 MIR92B-201ENST00000607575 96 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC004067.1-201ENST00000608733 700 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC091046.2-201ENST00000620775 665 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC009039.2-201ENST00000624524 529 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AC073325.2-201ENST00000339545 159 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 RNU5E-8P-201ENST00000363502 116 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 SNORA25.6-201ENST00000364121 118 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 RNA5SP72-201ENST00000364442 117 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 SNORA14A-201ENST00000364773 135 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 RNU6-1197P-201ENST00000391183 107 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AL512633.1-201ENST00000399931 655 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 RAP1BP1-201ENST00000412709 553 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 SSR1P2-201ENST00000415208 787 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 CCDC58P2-201ENST00000417131 366 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 ELOCP9-201ENST00000418624 239 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 TMEM167AP1-201ENST00000423409 219 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 PPP1R11P2-201ENST00000423543 382 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 MRPL50P4-201ENST00000446432 475 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AL031183.1-201ENST00000457667 207 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AL049714.1-201ENST00000466686 347 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AC034236.1-201ENST00000469891 373 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 RPL7P49-201ENST00000471402 708 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 RPL7P18-201ENST00000478965 734 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 RPL21P13-201ENST00000488305 481 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AC091951.3-201ENST00000504093 246 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AC110794.1-201ENST00000505816 425 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 SCARNA13-201ENST00000516672 275 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 RNU6-798P-201ENST00000516912 103 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AC069200.1-201ENST00000609511 323 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 BX664608.1-201ENST00000610519 487 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AC013470.4-201ENST00000619978 986 ntBASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DQA1P01909 AC011477.1-204ENST00000623416 1325 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 MTCO1P9-201ENST00000505577 1534 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AP003122.5-201ENST00000527668 3766 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC008568.2-201ENST00000623862 2313 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AL161781.1-201ENST00000354277 403 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 RNU6-97P-201ENST00000363387 104 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 RNU1-33P-201ENST00000364249 162 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 SNORA1.3-201ENST00000384676 136 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AL356421.1-201ENST00000403255 413 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 RNU6-757P-201ENST00000410334 100 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 RNU6-584P-201ENST00000410350 95 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 RNA5SP492-201ENST00000411330 114 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC063979.1-201ENST00000415539 377 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 AC018630.2-202ENST00000422992 927 ntBASIC2.17□□□□□ -2.06
HLA-DQA1P01909 RPL27AP8-201ENST00000424277 446 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms