Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AL049781.1-201ENST00000623195 3585 ntBASIC3.76□□□□□ -1.81
RTN3O95197 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
RTN3O95197 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.75□□□□□ -1.81
RTN3O95197 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RTN3O95197 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RTN3O95197 AC008568.2-201ENST00000623862 2313 ntBASIC3.75□□□□□ -1.81
RTN3O95197 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RTN3O95197 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RTN3O95197 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RTN3O95197 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RTN3O95197 RNU6-809P-201ENST00000384461 107 ntBASIC3.75□□□□□ -1.81
RTN3O95197 MIR19A-201ENST00000384878 82 ntBASIC3.75□□□□□ -1.81
RTN3O95197 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
RTN3O95197 AL391417.1-201ENST00000404100 426 ntBASIC3.75□□□□□ -1.81
RTN3O95197 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.75□□□□□ -1.81
RTN3O95197 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.75□□□□□ -1.81
RTN3O95197 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.75□□□□□ -1.81
RTN3O95197 FTH1P1-201ENST00000437933 532 ntBASIC3.75□□□□□ -1.81
RTN3O95197 AL162389.1-201ENST00000449233 177 ntBASIC3.75□□□□□ -1.81
RTN3O95197 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.75□□□□□ -1.81
RTN3O95197 SSXP4-201ENST00000451349 245 ntBASIC3.75□□□□□ -1.81
RTN3O95197 KATNBL1P6-201ENST00000453433 915 ntBASIC3.75□□□□□ -1.81
RTN3O95197 RPS27P29-201ENST00000463110 252 ntBASIC3.75□□□□□ -1.81
RTN3O95197 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RTN3O95197 AC023598.1-201ENST00000472521 361 ntBASIC3.75□□□□□ -1.81
RTN3O95197 RN7SL293P-201ENST00000481765 281 ntBASIC3.75□□□□□ -1.81
RTN3O95197 AC055855.1-201ENST00000489563 579 ntBASIC3.75□□□□□ -1.81
RTN3O95197 AC114967.1-201ENST00000504890 259 ntBASIC3.75□□□□□ -1.81
RTN3O95197 AC118465.1-201ENST00000513820 1271 ntBASIC3.75□□□□□ -1.81
RTN3O95197 AC119751.5-201ENST00000514077 770 ntBASIC3.75□□□□□ -1.81
RTN3O95197 RN7SKP83-201ENST00000516512 178 ntBASIC3.75□□□□□ -1.81
RTN3O95197 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.75□□□□□ -1.81
RTN3O95197 TRAV37-201ENST00000553906 342 ntBASIC3.75□□□□□ -1.81
RTN3O95197 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.75□□□□□ -1.81
RTN3O95197 AC109446.2-201ENST00000567872 497 ntBASIC3.75□□□□□ -1.81
RTN3O95197 MIR4738-201ENST00000579134 87 ntBASIC3.75□□□□□ -1.81
RTN3O95197 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.75□□□□□ -1.81
RTN3O95197 AL022161.1-201ENST00000604390 213 ntBASIC3.75□□□□□ -1.81
RTN3O95197 AP000254.1-201ENST00000609934 520 ntBASIC3.75□□□□□ -1.81
RTN3O95197 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.75□□□□□ -1.81
RTN3O95197 AC012314.7-201ENST00000619693 93 ntBASIC3.75□□□□□ -1.81
RTN3O95197 AL357559.1-201ENST00000622228 274 ntBASIC3.75□□□□□ -1.81
RTN3O95197 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RTN3O95197 AC021755.1-201ENST00000559747 1447 ntBASIC3.75□□□□□ -1.81
RTN3O95197 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RTN3O95197 MTND5P27-201ENST00000428871 1720 ntBASIC3.75□□□□□ -1.81
RTN3O95197 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RTN3O95197 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
RTN3O95197 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.75□□□□□ -1.81
RTN3O95197 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RTN3O95197 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.75□□□□□ -1.81
RTN3O95197 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
RTN3O95197 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RTN3O95197 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RTN3O95197 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RTN3O95197 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RTN3O95197 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.74□□□□□ -1.81
RTN3O95197 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.74□□□□□ -1.81
RTN3O95197 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.74□□□□□ -1.81
RTN3O95197 Y_RNA.46-201ENST00000362695 102 ntBASIC3.74□□□□□ -1.81
RTN3O95197 SNORA23-201ENST00000365128 182 ntBASIC3.74□□□□□ -1.81
RTN3O95197 SNORA36C-201ENST00000384289 132 ntBASIC3.74□□□□□ -1.81
RTN3O95197 AL109755.1-201ENST00000401791 649 ntBASIC3.74□□□□□ -1.81
RTN3O95197 RN7SKP53-201ENST00000411337 315 ntBASIC3.74□□□□□ -1.81
RTN3O95197 RPL7P8-201ENST00000411964 730 ntBASIC3.74□□□□□ -1.81
RTN3O95197 AC093578.1-201ENST00000415219 368 ntBASIC3.74□□□□□ -1.81
RTN3O95197 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.74□□□□□ -1.81
RTN3O95197 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.74□□□□□ -1.81
RTN3O95197 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.74□□□□□ -1.81
RTN3O95197 RBMY2UP-201ENST00000453474 324 ntBASIC3.74□□□□□ -1.81
RTN3O95197 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.74□□□□□ -1.81
RTN3O95197 AL049714.1-201ENST00000466686 347 ntBASIC3.74□□□□□ -1.81
RTN3O95197 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.74□□□□□ -1.81
RTN3O95197 AC010265.1-201ENST00000513509 211 ntBASIC3.74□□□□□ -1.81
RTN3O95197 RNU6-840P-201ENST00000517275 65 ntBASIC3.74□□□□□ -1.81
RTN3O95197 AC025881.1-201ENST00000518851 512 ntBASIC3.74□□□□□ -1.81
RTN3O95197 AP000889.1-201ENST00000530968 660 ntBASIC3.74□□□□□ -1.81
RTN3O95197 AP000857.1-201ENST00000532151 543 ntBASIC3.74□□□□□ -1.81
RTN3O95197 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.74□□□□□ -1.81
RTN3O95197 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.74□□□□□ -1.81
RTN3O95197 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RTN3O95197 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.74□□□□□ -1.81
RTN3O95197 ROCK1P1-201ENST00000573767 549 ntBASIC3.74□□□□□ -1.81
RTN3O95197 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.74□□□□□ -1.81
RTN3O95197 ZNF415P1-201ENST00000582279 1166 ntBASIC3.74□□□□□ -1.81
RTN3O95197 AL161756.2-201ENST00000604597 246 ntBASIC3.74□□□□□ -1.81
RTN3O95197 AC007038.2-201ENST00000608095 740 ntBASIC3.74□□□□□ -1.81
RTN3O95197 AC012360.2-201ENST00000609349 391 ntBASIC3.74□□□□□ -1.81
RTN3O95197 AC069200.1-201ENST00000609511 323 ntBASIC3.74□□□□□ -1.81
RTN3O95197 TUG1_2.1-201ENST00000614234 87 ntBASIC3.74□□□□□ -1.81
RTN3O95197 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
RTN3O95197 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RTN3O95197 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RTN3O95197 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RTN3O95197 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RTN3O95197 CEP170P1-201ENST00000502249 4587 ntBASIC3.73□□□□□ -1.81
RTN3O95197 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.73□□□□□ -1.81
RTN3O95197 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RTN3O95197 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RTN3O95197 AL079305.1-201ENST00000623159 3008 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms