Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 UBE2V1P13-201ENST00000436983 439 ntBASIC3.3□□□□□ -1.88
PRKNO60260 ARPC3P1-201ENST00000437218 533 ntBASIC3.3□□□□□ -1.88
PRKNO60260 RABEPKP1-201ENST00000440529 1026 ntBASIC3.3□□□□□ -1.88
PRKNO60260 MTND1P1-201ENST00000445453 368 ntBASIC3.3□□□□□ -1.88
PRKNO60260 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.3□□□□□ -1.88
PRKNO60260 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.3□□□□□ -1.88
PRKNO60260 SNORD105B-201ENST00000458770 79 ntBASIC3.3□□□□□ -1.88
PRKNO60260 RPS3AP17-201ENST00000472594 777 ntBASIC3.3□□□□□ -1.88
PRKNO60260 ST13P14-201ENST00000474095 734 ntBASIC3.3□□□□□ -1.88
PRKNO60260 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.3□□□□□ -1.88
PRKNO60260 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.3□□□□□ -1.88
PRKNO60260 AC017037.2-201ENST00000513850 890 ntBASIC3.3□□□□□ -1.88
PRKNO60260 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.3□□□□□ -1.88
PRKNO60260 SNORA70.14-201ENST00000516205 110 ntBASIC3.3□□□□□ -1.88
PRKNO60260 NARSP2-201ENST00000518524 679 ntBASIC3.3□□□□□ -1.88
PRKNO60260 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PRKNO60260 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.3□□□□□ -1.88
PRKNO60260 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.3□□□□□ -1.88
PRKNO60260 SETP7-201ENST00000552169 453 ntBASIC3.3□□□□□ -1.88
PRKNO60260 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.3□□□□□ -1.88
PRKNO60260 AC006116.10-201ENST00000591836 581 ntBASIC3.3□□□□□ -1.88
PRKNO60260 AP003465.2-201ENST00000602571 373 ntBASIC3.3□□□□□ -1.88
PRKNO60260 AC011468.4-201ENST00000603942 409 ntBASIC3.3□□□□□ -1.88
PRKNO60260 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.3□□□□□ -1.88
PRKNO60260 AC121334.2-201ENST00000605387 271 ntBASIC3.3□□□□□ -1.88
PRKNO60260 AC011816.2-201ENST00000607089 556 ntBASIC3.3□□□□□ -1.88
PRKNO60260 U3.45-201ENST00000607547 219 ntBASIC3.3□□□□□ -1.88
PRKNO60260 AL391813.2-201ENST00000609113 322 ntBASIC3.3□□□□□ -1.88
PRKNO60260 AC091304.9-201ENST00000612091 226 ntBASIC3.3□□□□□ -1.88
PRKNO60260 AC072046.2-201ENST00000618366 268 ntBASIC3.3□□□□□ -1.88
PRKNO60260 AC012150.2-201ENST00000621300 544 ntBASIC3.3□□□□□ -1.88
PRKNO60260 AC112204.3-201ENST00000623822 332 ntBASIC3.3□□□□□ -1.88
PRKNO60260 AC068880.5-201ENST00000624331 290 ntBASIC3.3□□□□□ -1.88
PRKNO60260 PISRT1-201ENST00000626175 531 ntBASIC3.3□□□□□ -1.88
PRKNO60260 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PRKNO60260 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PRKNO60260 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PRKNO60260 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
PRKNO60260 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PRKNO60260 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PRKNO60260 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PRKNO60260 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PRKNO60260 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PRKNO60260 AC011460.1-201ENST00000636268 1834 ntBASIC3.29□□□□□ -1.88
PRKNO60260 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PRKNO60260 RNA5SP322-201ENST00000363617 119 ntBASIC3.29□□□□□ -1.88
PRKNO60260 RNA5SP42-201ENST00000364278 115 ntBASIC3.29□□□□□ -1.88
PRKNO60260 MIR218-2-201ENST00000385006 110 ntBASIC3.29□□□□□ -1.88
PRKNO60260 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PRKNO60260 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PRKNO60260 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.29□□□□□ -1.88
PRKNO60260 MRPL42P2-201ENST00000403169 426 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AL391417.1-201ENST00000404100 426 ntBASIC3.29□□□□□ -1.88
PRKNO60260 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.29□□□□□ -1.88
PRKNO60260 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.29□□□□□ -1.88
PRKNO60260 AC006548.1-201ENST00000427470 102 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.29□□□□□ -1.88
PRKNO60260 MRPS18BP2-201ENST00000434310 759 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AL049734.2-201ENST00000441066 616 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.29□□□□□ -1.88
PRKNO60260 MTCO3P20-201ENST00000454926 688 ntBASIC3.29□□□□□ -1.88
PRKNO60260 HMGN2P7-201ENST00000456186 273 ntBASIC3.29□□□□□ -1.88
PRKNO60260 snoU109.4-201ENST00000458953 143 ntBASIC3.29□□□□□ -1.88
PRKNO60260 RN7SL293P-201ENST00000481765 281 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
PRKNO60260 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.29□□□□□ -1.88
PRKNO60260 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.29□□□□□ -1.88
PRKNO60260 AC110768.1-201ENST00000509222 400 ntBASIC3.29□□□□□ -1.88
PRKNO60260 MTCO2P4-201ENST00000517968 247 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.29□□□□□ -1.88
PRKNO60260 AC008489.1-201ENST00000524271 483 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AC103843.2-201ENST00000530523 682 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.29□□□□□ -1.88
PRKNO60260 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PRKNO60260 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.29□□□□□ -1.88
PRKNO60260 SETP2-201ENST00000553886 926 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.29□□□□□ -1.88
PRKNO60260 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.29□□□□□ -1.88
PRKNO60260 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.29□□□□□ -1.88
PRKNO60260 AL356432.3-201ENST00000568952 465 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.29□□□□□ -1.88
PRKNO60260 AP001094.1-201ENST00000579805 193 ntBASIC3.29□□□□□ -1.88
PRKNO60260 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.29□□□□□ -1.88
PRKNO60260 AC008739.3-201ENST00000603262 127 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AC024220.1-201ENST00000603675 484 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AC055876.5-201ENST00000605667 259 ntBASIC3.29□□□□□ -1.88
PRKNO60260 HMGN2P28-201ENST00000606102 262 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AC092794.1-201ENST00000612734 582 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AL391261.4-201ENST00000616012 481 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AC244100.1-202ENST00000621554 382 ntBASIC3.29□□□□□ -1.88
PRKNO60260 CR381572.1-201ENST00000625098 102 ntBASIC3.29□□□□□ -1.88
PRKNO60260 SEPT14P19-203ENST00000633205 211 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AC138649.5-201ENST00000637456 137 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AC244258.1-201ENST00000637553 1071 ntBASIC3.29□□□□□ -1.88
PRKNO60260 AL732372.2-225ENST00000642124 456 ntBASIC3.29□□□□□ -1.88
PRKNO60260 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PRKNO60260 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PRKNO60260 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.29□□□□□ -1.88
PRKNO60260 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PRKNO60260 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms