Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
CHMP2AO43633 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.69□□□□□ -1.98
CHMP2AO43633 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHMP2AO43633 Y_RNA.110-201ENST00000363220 99 ntBASIC2.69□□□□□ -1.98
CHMP2AO43633 MIR135A2-201ENST00000384854 100 ntBASIC2.69□□□□□ -1.98
CHMP2AO43633 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CHMP2AO43633 RPS4XP7-201ENST00000406274 780 ntBASIC2.69□□□□□ -1.98
CHMP2AO43633 AL133264.1-201ENST00000407157 562 ntBASIC2.69□□□□□ -1.98
CHMP2AO43633 SNORA11.2-201ENST00000408318 127 ntBASIC2.69□□□□□ -1.98
CHMP2AO43633 PSMA6P3-201ENST00000428242 164 ntBASIC2.69□□□□□ -1.98
CHMP2AO43633 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.69□□□□□ -1.98
CHMP2AO43633 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.69□□□□□ -1.98
CHMP2AO43633 AL049714.1-201ENST00000466686 347 ntBASIC2.69□□□□□ -1.98
CHMP2AO43633 RPL36AP51-201ENST00000487216 318 ntBASIC2.69□□□□□ -1.98
CHMP2AO43633 RPS27P26-201ENST00000494583 239 ntBASIC2.69□□□□□ -1.98
CHMP2AO43633 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHMP2AO43633 AP003122.3-201ENST00000526316 255 ntBASIC2.69□□□□□ -1.98
CHMP2AO43633 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.69□□□□□ -1.98
CHMP2AO43633 ZNF971P-201ENST00000562068 1249 ntBASIC2.69□□□□□ -1.98
CHMP2AO43633 OR4K8P-201ENST00000578842 1048 ntBASIC2.69□□□□□ -1.98
CHMP2AO43633 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.69□□□□□ -1.98
CHMP2AO43633 SNHG22-203ENST00000617833 660 ntBASIC2.69□□□□□ -1.98
CHMP2AO43633 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.69□□□□□ -1.98
CHMP2AO43633 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CHMP2AO43633 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.69□□□□□ -1.98
CHMP2AO43633 AC010149.2-201ENST00000637608 315 ntBASIC2.69□□□□□ -1.98
CHMP2AO43633 AC009812.4-201ENST00000569134 1805 ntBASIC2.69□□□□□ -1.98
CHMP2AO43633 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.69□□□□□ -1.98
CHMP2AO43633 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CHMP2AO43633 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CHMP2AO43633 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHMP2AO43633 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.69□□□□□ -1.98
CHMP2AO43633 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CHMP2AO43633 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHMP2AO43633 AC087359.1-201ENST00000508335 1740 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
CHMP2AO43633 AC008568.2-201ENST00000623862 2313 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 MIR627-201ENST00000384979 97 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP2AO43633 AL035407.1-201ENST00000429211 571 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP2AO43633 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP2AO43633 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.68□□□□□ -1.98
CHMP2AO43633 MTCO1P48-201ENST00000448024 1096 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 COX6CP18-201ENST00000448769 222 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 LINC00888-204ENST00000487386 421 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 MTCO2P9-201ENST00000503214 694 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP2AO43633 AC109464.2-201ENST00000510242 943 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP2AO43633 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP2AO43633 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHMP2AO43633 AC068339.2-201ENST00000534395 618 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 AC006518.2-201ENST00000542513 940 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.68□□□□□ -1.98
CHMP2AO43633 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP2AO43633 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.68□□□□□ -1.98
CHMP2AO43633 AC015688.2-201ENST00000584523 262 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 AC007938.3-201ENST00000604965 623 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 AC103810.6-201ENST00000606708 136 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHMP2AO43633 AC090772.4-201ENST00000623599 362 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 AC068880.5-201ENST00000624331 290 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 MIR1291-201ENST00000627649 87 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.68□□□□□ -1.98
CHMP2AO43633 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHMP2AO43633 AC012321.1-201ENST00000561622 1588 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
CHMP2AO43633 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHMP2AO43633 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHMP2AO43633 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.68□□□□□ -1.98
CHMP2AO43633 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.68□□□□□ -1.98
CHMP2AO43633 MTCO1P4-201ENST00000520516 1409 ntBASIC2.68□□□□□ -1.98
CHMP2AO43633 AC006020.1-201ENST00000420179 1854 ntBASIC2.67□□□□□ -1.98
CHMP2AO43633 NACA3P-201ENST00000359690 648 ntBASIC2.67□□□□□ -1.98
CHMP2AO43633 SNORA41-201ENST00000384675 132 ntBASIC2.67□□□□□ -1.98
CHMP2AO43633 RNU6-932P-201ENST00000391108 106 ntBASIC2.67□□□□□ -1.98
CHMP2AO43633 AL445529.1-201ENST00000398713 389 ntBASIC2.67□□□□□ -1.98
CHMP2AO43633 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.67□□□□□ -1.98
CHMP2AO43633 RPL27AP8-201ENST00000424277 446 ntBASIC2.67□□□□□ -1.98
CHMP2AO43633 RAC1P8-201ENST00000427086 527 ntBASIC2.67□□□□□ -1.98
CHMP2AO43633 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.67□□□□□ -1.98
CHMP2AO43633 ARPC3P1-201ENST00000437218 533 ntBASIC2.67□□□□□ -1.98
CHMP2AO43633 HIGD1AP2-201ENST00000446367 280 ntBASIC2.67□□□□□ -1.98
CHMP2AO43633 AL592447.1-201ENST00000447592 540 ntBASIC2.67□□□□□ -1.98
CHMP2AO43633 AC128713.1-201ENST00000471495 306 ntBASIC2.67□□□□□ -1.98
CHMP2AO43633 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.67□□□□□ -1.98
CHMP2AO43633 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.67□□□□□ -1.98
CHMP2AO43633 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.67□□□□□ -1.98
CHMP2AO43633 TBCAP3-201ENST00000512475 312 ntBASIC2.67□□□□□ -1.98
CHMP2AO43633 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.67□□□□□ -1.98
CHMP2AO43633 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CHMP2AO43633 HMGB1P41-201ENST00000520234 440 ntBASIC2.67□□□□□ -1.98
CHMP2AO43633 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.67□□□□□ -1.98
CHMP2AO43633 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.67□□□□□ -1.98
CHMP2AO43633 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.67□□□□□ -1.98
CHMP2AO43633 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.67□□□□□ -1.98
CHMP2AO43633 CR383656.7-201ENST00000548164 174 ntBASIC2.67□□□□□ -1.98
CHMP2AO43633 AL512310.1-201ENST00000548639 172 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms