Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 SDAD1P3-201ENST00000427380 333 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.03□□□□□ -2.24
LINC01549A6NIU2 AL139415.2-201ENST00000431968 163 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
LINC01549A6NIU2 ELOCP11-201ENST00000436690 332 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 AC003989.2-201ENST00000440224 169 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 ELOCP16-201ENST00000444494 332 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
LINC01549A6NIU2 TRGVB-201ENST00000453257 471 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 MTCYBP35-201ENST00000503630 1137 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 RNA5SP61-201ENST00000516453 100 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 AC087272.1-201ENST00000523624 533 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 CBX3P7-201ENST00000532876 502 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 AL512310.1-201ENST00000548639 172 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 MTCYBP23-201ENST00000558717 1102 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.03□□□□□ -2.24
LINC01549A6NIU2 AC078899.2-201ENST00000595282 212 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 AC012468.1-201ENST00000604888 430 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 AC243756.2-201ENST00000618406 463 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 MIR7843-201ENST00000622274 79 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.03□□□□□ -2.24
LINC01549A6NIU2 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.02□□□□□ -2.25
LINC01549A6NIU2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
LINC01549A6NIU2 DNAJC19P6-201ENST00000401853 280 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 MTND4LP21-201ENST00000415303 295 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 SNRPGP13-201ENST00000442212 177 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.02□□□□□ -2.25
LINC01549A6NIU2 AC007677.1-201ENST00000445757 515 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.02□□□□□ -2.25
LINC01549A6NIU2 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.02□□□□□ -2.25
LINC01549A6NIU2 RPS29P23-201ENST00000458635 123 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 RPL31P41-201ENST00000477967 372 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.02□□□□□ -2.25
LINC01549A6NIU2 AC093801.2-201ENST00000503966 1050 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.02□□□□□ -2.25
LINC01549A6NIU2 AC093770.1-201ENST00000511559 571 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 SNORA31.24-201ENST00000517232 57 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 AC103783.1-201ENST00000520506 373 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
LINC01549A6NIU2 AP005639.2-201ENST00000527592 928 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.02□□□□□ -2.25
LINC01549A6NIU2 SNORD53B-201ENST00000577887 78 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 MIR4299-201ENST00000577899 72 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 AL390838.2-201ENST00000602394 274 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 AL450336.1-201ENST00000605180 586 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.02□□□□□ -2.25
LINC01549A6NIU2 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.01□□□□□ -2.25
LINC01549A6NIU2 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.01□□□□□ -2.25
LINC01549A6NIU2 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.01□□□□□ -2.25
LINC01549A6NIU2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
LINC01549A6NIU2 SNORA68.1-201ENST00000364537 132 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 RNU6-19P-201ENST00000384718 107 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 MIR147B-201ENST00000390185 80 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 U3.26-201ENST00000391236 204 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 RNA5SP450-201ENST00000411206 102 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 OR9R1P-201ENST00000412200 877 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.01□□□□□ -2.25
LINC01549A6NIU2 RNF19BPX-201ENST00000426224 625 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 AC023347.2-201ENST00000433994 462 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 AL831737.1-201ENST00000441288 271 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 AC118469.1-201ENST00000442943 488 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.01□□□□□ -2.25
LINC01549A6NIU2 AC004022.1-201ENST00000447766 1066 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.01□□□□□ -2.25
LINC01549A6NIU2 USP9YP10-201ENST00000454868 628 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 AC107398.1-201ENST00000486904 505 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 AC021146.7-201ENST00000509604 775 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 TPT1P8-201ENST00000510120 555 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 RNU6-928P-201ENST00000516876 104 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 SNORA31.25-201ENST00000517242 134 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.01□□□□□ -2.25
LINC01549A6NIU2 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.01□□□□□ -2.25
LINC01549A6NIU2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LINC01549A6NIU2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.01□□□□□ -2.25
LINC01549A6NIU2 AC025165.5-201ENST00000602802 578 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.01□□□□□ -2.25
LINC01549A6NIU2 AL513477.2-201ENST00000607858 568 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 AC006338.1-201ENST00000618453 749 ntBASIC1.01□□□□□ -2.25
LINC01549A6NIU2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LINC01549A6NIU2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.01□□□□□ -2.25
LINC01549A6NIU2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
LINC01549A6NIU2 AC008555.8-201ENST00000623602 2168 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1□□□□□ -2.25
LINC01549A6NIU2 AC025263.3-201ENST00000622965 1396 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1□□□□□ -2.25
LINC01549A6NIU2 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
LINC01549A6NIU2 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
LINC01549A6NIU2 RNU6-253P-201ENST00000384730 105 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 AC016769.3-201ENST00000396562 315 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 UBE2FP1-201ENST00000416536 447 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 Z98742.3-201ENST00000418637 326 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1□□□□□ -2.25
LINC01549A6NIU2 AC003685.2-201ENST00000422795 395 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 AL513185.2-201ENST00000425543 193 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 AL353689.1-201ENST00000438895 199 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 FAM103A2P-201ENST00000444122 354 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1□□□□□ -2.25
LINC01549A6NIU2 MTATP6P7-201ENST00000453315 681 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 snoU109.1-201ENST00000459339 135 ntBASIC1□□□□□ -2.25
LINC01549A6NIU2 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms