Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 RPS3AP22-201ENST00000488297 769 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 RN7SL274P-201ENST00000492268 272 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 RNU6-56P-201ENST00000516986 93 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AC008127.2-201ENST00000549925 1075 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.54□□□□□ -2.16
CNOT1A5YKK6 STMN1P1-201ENST00000617809 440 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AC022513.1-201ENST00000624512 117 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.54□□□□□ -2.16
CNOT1A5YKK6 CDC27P3-201ENST00000635418 1910 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CNOT1A5YKK6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CNOT1A5YKK6 RNU6-60P-201ENST00000364792 103 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CNOT1A5YKK6 SRIP3-201ENST00000413200 219 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AL691517.1-201ENST00000440833 1235 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 OR7L1P-201ENST00000456181 380 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AC069528.1-202ENST00000482888 637 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 RNA5SP121-201ENST00000516537 101 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 RN7SKP49-201ENST00000516675 260 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AP004242.1-201ENST00000533701 349 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 CR383656.8-201ENST00000549046 145 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AC103810.8-201ENST00000607347 118 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AC011472.4-201ENST00000615848 491 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AC025016.1-201ENST00000616746 682 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
CNOT1A5YKK6 ZNF209P-201ENST00000593450 2304 ntBASIC1.53□□□□□ -2.16
CNOT1A5YKK6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.53□□□□□ -2.16
CNOT1A5YKK6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
CNOT1A5YKK6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CNOT1A5YKK6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CNOT1A5YKK6 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.53□□□□□ -2.16
CNOT1A5YKK6 DYNLL1P5-201ENST00000467158 270 ntBASIC1.53□□□□□ -2.16
CNOT1A5YKK6 AC108078.1-201ENST00000508073 725 ntBASIC1.53□□□□□ -2.16
CNOT1A5YKK6 AC245036.5-201ENST00000596330 847 ntBASIC1.53□□□□□ -2.16
CNOT1A5YKK6 AL049779.4-201ENST00000604500 156 ntBASIC1.53□□□□□ -2.16
CNOT1A5YKK6 RMST_6.1-201ENST00000611980 203 ntBASIC1.53□□□□□ -2.16
CNOT1A5YKK6 AC090617.7-201ENST00000623952 126 ntBASIC1.53□□□□□ -2.16
CNOT1A5YKK6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CNOT1A5YKK6 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.53□□□□□ -2.17
CNOT1A5YKK6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.53□□□□□ -2.17
CNOT1A5YKK6 RNA5SP257-201ENST00000363023 116 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 Y_RNA.471-201ENST00000384312 102 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.52□□□□□ -2.17
CNOT1A5YKK6 AC109583.1-201ENST00000432156 268 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 RFC5P1-201ENST00000454419 874 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 AIG1P1-201ENST00000503376 148 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.52□□□□□ -2.17
CNOT1A5YKK6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.52□□□□□ -2.17
CNOT1A5YKK6 RNU1-40P-201ENST00000516816 164 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 RNU1-97P-201ENST00000516872 164 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 GLYCAM1-201ENST00000546596 285 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 AC103810.1-201ENST00000579873 453 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 AP002907.1-201ENST00000606361 1430 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CNOT1A5YKK6 UBE2L2-201ENST00000254302 429 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 POLHP1-201ENST00000411806 470 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.52□□□□□ -2.17
CNOT1A5YKK6 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.52□□□□□ -2.17
CNOT1A5YKK6 AC079203.1-201ENST00000487972 404 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 AC090255.1-201ENST00000495779 349 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.52□□□□□ -2.17
CNOT1A5YKK6 CYP3A137P-201ENST00000562436 69 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 MIR4448-201ENST00000584360 86 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 HSPE1P14-201ENST00000605812 302 ntBASIC1.52□□□□□ -2.17
CNOT1A5YKK6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CNOT1A5YKK6 RNU1-93P-201ENST00000364704 169 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 CCNB2P1-201ENST00000399411 1150 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 MTND4P13-201ENST00000402078 1023 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 RNA5SP338-201ENST00000410495 85 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 AF274854.1-201ENST00000413236 615 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 CALM1P1-201ENST00000442082 433 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 TPT1P14-201ENST00000448018 505 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CNOT1A5YKK6 KATNBL1P1-201ENST00000605192 748 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 RPL23AP88-201ENST00000605759 454 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 MIR98-201ENST00000606724 119 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 MTND4P34-201ENST00000572715 1371 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CNOT1A5YKK6 Y_RNA.274-201ENST00000364714 101 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 RPL23AP29-201ENST00000397284 453 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 USP9YP33-201ENST00000412220 421 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 MTND2P16-201ENST00000419987 799 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 USP9YP35-201ENST00000435696 412 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 AC078918.1-201ENST00000498515 228 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CNOT1A5YKK6 MIR4419B-201ENST00000577260 68 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 MIR1273G-201ENST00000577677 100 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 AL136164.4-201ENST00000625013 2135 ntBASIC1.51□□□□□ -2.17
CNOT1A5YKK6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
CNOT1A5YKK6 METTL21EP-201ENST00000298105 713 ntBASIC1.5□□□□□ -2.17
CNOT1A5YKK6 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.5□□□□□ -2.17
CNOT1A5YKK6 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.5□□□□□ -2.17
CNOT1A5YKK6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms