Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC093838.1-201ENST00000613014 469 ntBASIC1.75□□□□□ -2.13
TRAV4A0A0B4J268 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV4A0A0B4J268 AC011330.2-201ENST00000621680 635 ntBASIC1.75□□□□□ -2.13
TRAV4A0A0B4J268 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.75□□□□□ -2.13
TRAV4A0A0B4J268 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
TRAV4A0A0B4J268 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 AC062016.1-201ENST00000355719 319 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 SNORA3A-201ENST00000364113 130 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 RPS3AP24-201ENST00000407896 734 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 Z92545.1-201ENST00000411782 234 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 OR51A3P-201ENST00000413596 924 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 AL158825.1-201ENST00000414735 521 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 USP12PX-201ENST00000432383 1057 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 AL512844.2-201ENST00000433990 593 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 TAAR7P-201ENST00000436141 242 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 Z80107.1-201ENST00000436830 412 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 AC005002.1-201ENST00000447458 540 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 RN7SL432P-201ENST00000484057 298 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 AC109464.2-201ENST00000510242 943 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 RNU5A-7P-201ENST00000515979 116 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 RNA5SP320-201ENST00000516263 124 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 RNU6-416P-201ENST00000516265 103 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 RNA5SP24-201ENST00000516478 95 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 ARL2BPP5-201ENST00000523141 481 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 AC124293.1-201ENST00000530034 493 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 AC087241.2-201ENST00000535801 324 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 EIF4BP1-201ENST00000554881 351 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 AL020997.3-201ENST00000602843 359 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 MTND5P11-201ENST00000511037 1812 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 CCT4P2-201ENST00000233836 1548 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 DDX10P1-201ENST00000448545 1933 ntBASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
TRAV4A0A0B4J268 MTND4P27-201ENST00000450813 1354 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 RPL21P132-201ENST00000331267 462 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 SNORA51.6-201ENST00000384151 125 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AL359511.1-201ENST00000402970 211 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 SNORD23.1-201ENST00000408212 104 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 RPS7P9-201ENST00000414704 586 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 Z85995.1-201ENST00000415547 335 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 NPM1P11-201ENST00000417106 855 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 NUP35P1-201ENST00000422734 947 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AC091390.3-201ENST00000426478 338 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 RPL31P54-201ENST00000429803 370 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AL929288.2-201ENST00000446368 407 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AC108734.3-201ENST00000481241 1165 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 GTF2IP9-201ENST00000502460 301 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 XKRY-201ENST00000510392 1100 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 SCARNA11.3-201ENST00000517276 130 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AC135628.1-201ENST00000568867 534 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 OR4K7P-201ENST00000580232 945 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AC007621.1-201ENST00000604544 437 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AL031176.1-201ENST00000604554 466 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AC067747.1-201ENST00000608026 250 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AC009090.3-201ENST00000616553 565 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 ZNF720P1-201ENST00000562403 1939 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 OR4G11P-202ENST00000642116 1414 ntBASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV4A0A0B4J268 AC004944.1-201ENST00000517807 3059 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 SNORA80A-201ENST00000363922 136 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 RNU6-115P-201ENST00000364310 107 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 RNU4-52P-201ENST00000384209 138 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 RNU6-301P-201ENST00000384277 107 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 MIR325-201ENST00000385260 98 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 U3.40-201ENST00000408706 208 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms