Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.12□□□□□ -2.07
TRAV8-4A0A0B4J246 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRAV8-4A0A0B4J246 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
TRAV8-4A0A0B4J246 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAV8-4A0A0B4J246 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 RNU6-1078P-201ENST00000364522 103 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 RNU6-359P-201ENST00000365466 108 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 RNU6-637P-201ENST00000384050 107 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 SNORA40.2-201ENST00000390847 128 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC110754.1-201ENST00000399740 601 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC007919.1-201ENST00000429380 217 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 RPS12P18-201ENST00000442381 270 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC002381.1-201ENST00000447049 280 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 snoU13.22-201ENST00000459428 104 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC097493.1-201ENST00000463958 372 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC126182.1-201ENST00000478134 357 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 KC877373.1-201ENST00000479066 408 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 EIF4EP3-201ENST00000498782 656 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 RNU6-840P-201ENST00000517275 65 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC022634.1-201ENST00000520765 532 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 SUB1P1-201ENST00000524415 382 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 ATP5F1P5-201ENST00000526403 760 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AP003497.1-201ENST00000528472 562 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 OR6C7P-201ENST00000547875 934 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 NRBF2P5-201ENST00000603087 788 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC024060.1-201ENST00000607052 494 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC006133.1-201ENST00000617106 264 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 AC079228.1-201ENST00000624774 1049 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 MIR4275-201ENST00000636486 87 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 CCT4P2-201ENST00000233836 1548 ntBASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TRAV8-4A0A0B4J246 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 SNORA23-201ENST00000365128 182 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 SNORA7.4-201ENST00000384249 137 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 MIR490-201ENST00000384865 128 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 MIR181B1-201ENST00000385240 110 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AL139095.1-201ENST00000404326 391 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 TPMTP3-201ENST00000411928 735 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 ZNF863P-201ENST00000426746 417 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AL445687.1-201ENST00000439946 251 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 VN1R34P-201ENST00000447387 883 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 ATG12P2-201ENST00000456830 416 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 RPS20P20-201ENST00000460498 340 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 RN7SL863P-201ENST00000462370 296 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 FAM133DP-201ENST00000464802 691 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 RN7SL807P-201ENST00000470923 297 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AC103975.1-201ENST00000482506 483 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 SUMO2P5-201ENST00000506790 245 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AC114786.4-201ENST00000508771 728 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AC114797.1-201ENST00000514003 728 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 SNORA67.7-201ENST00000516664 135 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 NRON-201ENST00000517270 370 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 COX6CP5-201ENST00000527162 228 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AC005832.3-201ENST00000537929 631 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AL132657.2-201ENST00000564417 358 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AC025281.1-201ENST00000567026 265 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 RPL23AP84-201ENST00000571193 464 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 MIR3117-201ENST00000584034 78 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AL161729.4-201ENST00000604650 476 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 MTND4LP5-201ENST00000605152 292 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AC112220.2-201ENST00000605513 533 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AL109618.2-201ENST00000605527 211 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AC013476.2-201ENST00000614456 459 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 AL079343.1-201ENST00000572358 1771 ntBASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TRAV8-4A0A0B4J246 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.09□□□□□ -2.07
TRAV8-4A0A0B4J246 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms