Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 SNORD27.1-201ENST00000516319 72 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 Y_RNA.702-201ENST00000516843 96 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 RNU1-45P-201ENST00000517191 141 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 HMGB1P41-201ENST00000520234 440 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 AC123904.3-201ENST00000547218 814 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 AC012182.1-201ENST00000570133 895 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 AC005730.3-201ENST00000583067 366 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 MIR3158-1-201ENST00000583596 81 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 SNHG22-203ENST00000617833 660 ntBASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PCDHB1Q9Y5F3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 MIR554-201ENST00000384874 96 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 RNU6-1158P-201ENST00000391167 107 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 MIR1179-201ENST00000408703 91 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 RNU6-908P-201ENST00000410160 94 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 RN7SKP202-201ENST00000410439 330 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 RNU2-39P-201ENST00000410604 198 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AC138393.2-201ENST00000414742 246 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 RWDD4P2-201ENST00000426392 563 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AL117339.2-201ENST00000430475 180 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 RPL36AP6-201ENST00000435770 321 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AC004866.2-201ENST00000438285 481 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 RPL23AP52-201ENST00000439311 478 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 SNRPGP6-201ENST00000451124 220 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 RPL23AP81-201ENST00000455252 467 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 RNU7-63P-201ENST00000459054 62 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AC079804.1-201ENST00000461922 436 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 RN7SL132P-201ENST00000478131 296 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AP002812.1-201ENST00000495378 474 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AC105417.1-201ENST00000514691 285 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 SNORA40.12-201ENST00000516329 111 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 RNA5SP73-201ENST00000516744 108 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AP001646.1-201ENST00000527936 915 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 OR5BN1P-201ENST00000532955 829 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AC034105.3-201ENST00000565294 442 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AC055876.1-202ENST00000567053 138 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 CYP4A43P-201ENST00000568156 121 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 MIR4293-201ENST00000584305 78 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 MIR4719-201ENST00000585233 84 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AL354984.3-201ENST00000604803 325 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 HMGN2P28-201ENST00000606102 262 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AL031666.3-201ENST00000609320 1006 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AL450472.3-201ENST00000615578 367 ntBASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHB1Q9Y5F3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 SNORA62.3-201ENST00000365110 153 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 RNU5E-6P-201ENST00000365574 115 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 SNORA69-201ENST00000383895 132 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 AC016831.2-201ENST00000417179 352 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 AC016691.1-201ENST00000441321 413 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 MTCO3P45-201ENST00000443036 613 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 AMD1P1-201ENST00000457220 922 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 RPS29P25-201ENST00000481709 171 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 AL132838.2-201ENST00000492041 314 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms