Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC136601.2-201ENST00000604356 474 ntBASIC1.25□□□□□ -2.21
UBE2D4Q9Y2X8 AC015849.6-201ENST00000605454 474 ntBASIC1.25□□□□□ -2.21
UBE2D4Q9Y2X8 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.25□□□□□ -2.21
UBE2D4Q9Y2X8 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.25□□□□□ -2.21
UBE2D4Q9Y2X8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.25□□□□□ -2.21
UBE2D4Q9Y2X8 AC103710.2-202ENST00000641454 2853 ntBASIC1.25□□□□□ -2.21
UBE2D4Q9Y2X8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 RNU6-666P-201ENST00000363499 107 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 MIR1250-201ENST00000408098 113 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 VN1R51P-201ENST00000411675 945 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 Z98742.3-201ENST00000418637 326 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 PGBD4P6-201ENST00000421501 610 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AL445685.2-201ENST00000422551 342 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AL139415.2-201ENST00000431968 163 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 OSTCP8-201ENST00000445117 448 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AL513124.1-201ENST00000450410 614 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC096992.1-201ENST00000459808 709 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 RPS29P20-201ENST00000489592 171 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC106872.3-201ENST00000495104 446 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 OR52A4P-203ENST00000498233 1014 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC020699.1-201ENST00000505161 445 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 COL6A4P2-205ENST00000509855 506 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AL512310.1-201ENST00000548639 172 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC023824.2-201ENST00000566185 400 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC106734.1-201ENST00000568646 663 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC022662.1-201ENST00000580252 331 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC010928.2-201ENST00000588017 287 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC004908.2-201ENST00000609090 574 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC012150.2-201ENST00000621300 544 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC024023.1-201ENST00000624530 922 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC116618.1-201ENST00000634617 774 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.24□□□□□ -2.21
UBE2D4Q9Y2X8 AC008669.1-201ENST00000565823 2178 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 CYCSP45-201ENST00000402289 315 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 OOSP1P1-201ENST00000423265 274 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 HMGB3P12-201ENST00000438745 556 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 AL513321.1-201ENST00000441175 761 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 Z77249.1-201ENST00000444622 1175 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 SNRPGP6-201ENST00000451124 220 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 CABYRP1-201ENST00000465493 1045 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 BZW1P2-201ENST00000473537 826 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 RPL31P41-201ENST00000477967 372 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 AC034222.1-201ENST00000494052 532 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 HMGB1P47-201ENST00000511281 589 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 SNORA31.18-201ENST00000517043 134 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 RANP3-201ENST00000530970 276 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 AC090751.1-201ENST00000566966 267 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 AC020658.4-201ENST00000613987 684 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 AC005858.4-201ENST00000623191 700 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 AC092881.1-201ENST00000638218 2733 ntBASIC1.23□□□□□ -2.21
UBE2D4Q9Y2X8 AL137003.2-201ENST00000606924 2538 ntBASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 RNA5SP126-201ENST00000365092 109 ntBASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 AC019129.1-201ENST00000403786 261 ntBASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 GSTA9P-201ENST00000406231 611 ntBASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 AL357078.2-201ENST00000416486 427 ntBASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 AC008173.1-201ENST00000418901 264 ntBASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 AL356867.1-201ENST00000429623 299 ntBASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 AC004866.2-201ENST00000438285 481 ntBASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 USP9YP15-201ENST00000442391 422 ntBASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 FAM103A2P-201ENST00000444122 354 ntBASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 RPL7P12-201ENST00000446719 750 ntBASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 ANKRD26P4-201ENST00000455755 950 ntBASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 RPL7P18-201ENST00000478965 734 ntBASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
UBE2D4Q9Y2X8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms