Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 RNU6-853P-201ENST00000364306 107 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 SNORA70E-201ENST00000384492 135 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 RNU6-878P-201ENST00000384578 110 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AL138878.1-201ENST00000405131 347 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 Y_RNA.608-201ENST00000410647 95 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 UBE2V1P10-201ENST00000414685 269 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 NANOGNBP1-201ENST00000448444 480 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 CEACAMP4-201ENST00000457676 421 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC146507.1-201ENST00000468335 354 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 RPL7P49-201ENST00000471402 708 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC104563.1-201ENST00000476147 376 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 LARP1BP2-201ENST00000486594 519 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC023424.2-201ENST00000493479 777 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 OR5H5P-201ENST00000503164 928 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AF213884.2-201ENST00000510417 903 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC074250.1-201ENST00000511117 192 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC022878.1-201ENST00000530684 149 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC016957.1-201ENST00000534895 309 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC074050.1-201ENST00000563247 211 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC009977.1-201ENST00000586015 570 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AL353997.4-201ENST00000586196 166 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 TPMTP1-201ENST00000592307 737 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC012468.1-201ENST00000604888 430 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC138749.5-201ENST00000611461 208 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AC116165.2-201ENST00000616705 206 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 AL049780.3-201ENST00000624612 1583 ntBASIC3.62□□□□□ -1.83
SIX4Q9UIU6 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SIX4Q9UIU6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 RNA5SP267-201ENST00000364893 126 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 RNU6-1042P-201ENST00000384204 107 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 U3.29-201ENST00000391296 212 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 MTCO3P30-201ENST00000426425 670 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AC005326.1-201ENST00000429197 123 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 SDCBPP1-201ENST00000440192 890 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 PGBD4P3-201ENST00000440731 581 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 FAM103A2P-201ENST00000444122 354 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 MRPS31P2-201ENST00000451581 518 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 RPL9P33-201ENST00000484311 566 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AC112204.1-201ENST00000502591 103 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AC006270.2-201ENST00000578523 652 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AP001094.1-201ENST00000579805 193 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 SRGNP1-201ENST00000603392 451 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AC110741.2-201ENST00000605278 268 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.61□□□□□ -1.83
SIX4Q9UIU6 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SIX4Q9UIU6 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AL133383.2-201ENST00000622958 2336 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms