Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN11AQ9UI33 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN11AQ9UI33 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN11AQ9UI33 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN11AQ9UI33 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN11AQ9UI33 MIR3935-201ENST00000583472 104 ntBASIC2.07□□□□□ -2.08
SCN11AQ9UI33 APOOP1-201ENST00000604695 592 ntBASIC2.07□□□□□ -2.08
SCN11AQ9UI33 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SCN11AQ9UI33 AL035405.1-201ENST00000400795 710 ntBASIC2.06□□□□□ -2.08
SCN11AQ9UI33 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.06□□□□□ -2.08
SCN11AQ9UI33 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN11AQ9UI33 HMGB1P27-201ENST00000431429 603 ntBASIC2.06□□□□□ -2.08
SCN11AQ9UI33 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.06□□□□□ -2.08
SCN11AQ9UI33 ATP5J2P3-201ENST00000451550 258 ntBASIC2.06□□□□□ -2.08
SCN11AQ9UI33 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SCN11AQ9UI33 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN11AQ9UI33 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN11AQ9UI33 RNA5SP102-201ENST00000516865 106 ntBASIC2.06□□□□□ -2.08
SCN11AQ9UI33 RNU6-711P-201ENST00000517255 106 ntBASIC2.06□□□□□ -2.08
SCN11AQ9UI33 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN11AQ9UI33 AC087441.2-201ENST00000529141 262 ntBASIC2.06□□□□□ -2.08
SCN11AQ9UI33 AC007115.1-201ENST00000546853 234 ntBASIC2.06□□□□□ -2.08
SCN11AQ9UI33 AL109653.1-201ENST00000603091 248 ntBASIC2.06□□□□□ -2.08
SCN11AQ9UI33 HSPE1P11-201ENST00000339579 310 ntBASIC2.05□□□□□ -2.08
SCN11AQ9UI33 RPS3AP9-201ENST00000417027 792 ntBASIC2.05□□□□□ -2.08
SCN11AQ9UI33 RNU1-123P-201ENST00000458950 160 ntBASIC2.05□□□□□ -2.08
SCN11AQ9UI33 RPL21P103-201ENST00000479921 488 ntBASIC2.05□□□□□ -2.08
SCN11AQ9UI33 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SCN11AQ9UI33 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN11AQ9UI33 DNAJC8P1-201ENST00000554535 372 ntBASIC2.05□□□□□ -2.08
SCN11AQ9UI33 AC024614.2-201ENST00000577584 372 ntBASIC2.05□□□□□ -2.08
SCN11AQ9UI33 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN11AQ9UI33 AC098848.2-201ENST00000588023 330 ntBASIC2.05□□□□□ -2.08
SCN11AQ9UI33 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SCN11AQ9UI33 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
SCN11AQ9UI33 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN11AQ9UI33 MTCYBP45-201ENST00000435243 565 ntBASIC2.05□□□□□ -2.08
SCN11AQ9UI33 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.05□□□□□ -2.08
SCN11AQ9UI33 BNIP3P2-201ENST00000441221 577 ntBASIC2.05□□□□□ -2.08
SCN11AQ9UI33 AC023050.1-201ENST00000498198 304 ntBASIC2.05□□□□□ -2.08
SCN11AQ9UI33 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN11AQ9UI33 AC021146.7-201ENST00000509604 775 ntBASIC2.05□□□□□ -2.08
SCN11AQ9UI33 AC084851.1-201ENST00000529105 249 ntBASIC2.05□□□□□ -2.08
SCN11AQ9UI33 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.05□□□□□ -2.08
SCN11AQ9UI33 RMST_6.1-201ENST00000611980 203 ntBASIC2.05□□□□□ -2.08
SCN11AQ9UI33 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
SCN11AQ9UI33 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
SCN11AQ9UI33 AL356057.2-201ENST00000403318 432 ntBASIC2.04□□□□□ -2.08
SCN11AQ9UI33 AC092447.6-201ENST00000414578 210 ntBASIC2.04□□□□□ -2.08
SCN11AQ9UI33 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.04□□□□□ -2.08
SCN11AQ9UI33 PPP1R2P5-201ENST00000457256 603 ntBASIC2.04□□□□□ -2.08
SCN11AQ9UI33 PSMA3P-201ENST00000555485 635 ntBASIC2.04□□□□□ -2.08
SCN11AQ9UI33 AC098679.5-201ENST00000624394 571 ntBASIC2.04□□□□□ -2.08
SCN11AQ9UI33 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.04□□□□□ -2.08
SCN11AQ9UI33 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SCN11AQ9UI33 AL136164.4-201ENST00000625013 2135 ntBASIC2.03□□□□□ -2.08
SCN11AQ9UI33 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SCN11AQ9UI33 RPL31P52-201ENST00000407532 367 ntBASIC2.03□□□□□ -2.08
SCN11AQ9UI33 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SCN11AQ9UI33 AL358075.3-201ENST00000426289 226 ntBASIC2.03□□□□□ -2.08
SCN11AQ9UI33 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SCN11AQ9UI33 RPS4XP11-201ENST00000446897 772 ntBASIC2.03□□□□□ -2.08
SCN11AQ9UI33 HMGN2P16-201ENST00000456802 261 ntBASIC2.03□□□□□ -2.08
SCN11AQ9UI33 HMGB1P47-201ENST00000511281 589 ntBASIC2.03□□□□□ -2.08
SCN11AQ9UI33 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.03□□□□□ -2.08
SCN11AQ9UI33 AC015720.1-201ENST00000565251 277 ntBASIC2.03□□□□□ -2.08
SCN11AQ9UI33 MIR4421-201ENST00000578133 69 ntBASIC2.03□□□□□ -2.08
SCN11AQ9UI33 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN11AQ9UI33 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
SCN11AQ9UI33 MTND5P3-201ENST00000438536 1800 ntBASIC2.03□□□□□ -2.08
SCN11AQ9UI33 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SCN11AQ9UI33 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.03□□□□□ -2.08
SCN11AQ9UI33 AC002546.1-201ENST00000588041 2504 ntBASIC2.03□□□□□ -2.08
SCN11AQ9UI33 RNU6-60P-201ENST00000364792 103 ntBASIC2.03□□□□□ -2.09
SCN11AQ9UI33 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.03□□□□□ -2.09
SCN11AQ9UI33 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.03□□□□□ -2.09
SCN11AQ9UI33 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.03□□□□□ -2.09
SCN11AQ9UI33 RBM43P1-201ENST00000476891 1081 ntBASIC2.03□□□□□ -2.09
SCN11AQ9UI33 AC121758.2-201ENST00000553271 193 ntBASIC2.03□□□□□ -2.09
SCN11AQ9UI33 AL161670.1-201ENST00000554348 137 ntBASIC2.03□□□□□ -2.09
SCN11AQ9UI33 OR4K8P-201ENST00000578842 1048 ntBASIC2.03□□□□□ -2.09
SCN11AQ9UI33 DUXAP4-201ENST00000603046 613 ntBASIC2.03□□□□□ -2.09
SCN11AQ9UI33 AL512598.1-201ENST00000610158 273 ntBASIC2.03□□□□□ -2.09
SCN11AQ9UI33 AL158801.5-201ENST00000623123 465 ntBASIC2.03□□□□□ -2.09
SCN11AQ9UI33 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.03□□□□□ -2.09
SCN11AQ9UI33 AC008568.2-201ENST00000623862 2313 ntBASIC2.02□□□□□ -2.09
SCN11AQ9UI33 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SCN11AQ9UI33 Y_RNA.327-201ENST00000365201 102 ntBASIC2.02□□□□□ -2.09
SCN11AQ9UI33 RNU6-174P-201ENST00000410406 106 ntBASIC2.02□□□□□ -2.09
SCN11AQ9UI33 RNU2-71P-201ENST00000411395 189 ntBASIC2.02□□□□□ -2.09
SCN11AQ9UI33 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SCN11AQ9UI33 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.02□□□□□ -2.09
SCN11AQ9UI33 AL359740.1-201ENST00000624340 592 ntBASIC2.02□□□□□ -2.09
SCN11AQ9UI33 MIR96-201ENST00000362288 78 ntBASIC2.01□□□□□ -2.09
SCN11AQ9UI33 UBE2V1P5-201ENST00000440070 405 ntBASIC2.01□□□□□ -2.09
SCN11AQ9UI33 AC105429.2-201ENST00000610567 517 ntBASIC2.01□□□□□ -2.09
SCN11AQ9UI33 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
SCN11AQ9UI33 PVT1_3.1-201ENST00000620853 95 ntBASIC2.01□□□□□ -2.09
SCN11AQ9UI33 HPVC1-201ENST00000629899 1198 ntBASIC2.01□□□□□ -2.09
SCN11AQ9UI33 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms