Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL732372.2-225ENST00000642124 456 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNTN3Q9P232 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CNTN3Q9P232 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTN3Q9P232 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CNTN3Q9P232 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CNTN3Q9P232 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTN3Q9P232 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTN3Q9P232 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNTN3Q9P232 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CNTN3Q9P232 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNTN3Q9P232 SNORD62.1-201ENST00000362541 86 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 Y_RNA.153-201ENST00000363615 91 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 RN7SKP103-201ENST00000363848 320 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 RNU6-701P-201ENST00000384059 107 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 MIR585-201ENST00000384887 94 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 RN7SKP16-201ENST00000410180 299 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 CTSL3P-202ENST00000412179 788 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.36□□□□□ -1.55
CNTN3Q9P232 RPS27AP12-201ENST00000429552 465 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 AL049745.1-201ENST00000433953 286 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.36□□□□□ -1.55
CNTN3Q9P232 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.36□□□□□ -1.55
CNTN3Q9P232 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.36□□□□□ -1.55
CNTN3Q9P232 RPL21P103-201ENST00000479921 488 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.36□□□□□ -1.55
CNTN3Q9P232 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.36□□□□□ -1.55
CNTN3Q9P232 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.36□□□□□ -1.55
CNTN3Q9P232 RNU6-475P-201ENST00000516073 104 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 RNA5SP392-201ENST00000516905 112 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.36□□□□□ -1.55
CNTN3Q9P232 MIR4700-201ENST00000578311 74 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 AC104695.3-201ENST00000604052 296 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 AC100827.5-201ENST00000615883 426 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.36□□□□□ -1.55
CNTN3Q9P232 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.36□□□□□ -1.55
CNTN3Q9P232 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CNTN3Q9P232 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
CNTN3Q9P232 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CNTN3Q9P232 AC099654.2-201ENST00000433031 1980 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
CNTN3Q9P232 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNTN3Q9P232 AC083843.2-201ENST00000568248 6253 ntBASIC5.36□□□□□ -1.55
CNTN3Q9P232 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CNTN3Q9P232 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNTN3Q9P232 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CNTN3Q9P232 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 RNU6-99P-201ENST00000364721 107 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 Y_RNA.493-201ENST00000384422 102 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 Y_RNA.496-201ENST00000384444 101 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 RPL21P109-201ENST00000422213 475 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 DPH3P2-201ENST00000422618 250 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 RPL7P37-201ENST00000425095 738 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 AL669831.1-202ENST00000428504 417 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 ELOCP18-201ENST00000434209 337 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 AL359672.1-201ENST00000442302 409 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 RPL29P29-201ENST00000448725 423 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 AC103987.1-201ENST00000473394 348 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 IGLV2-34-201ENST00000490007 283 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 RPS23P1-201ENST00000491662 432 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 DEFB109F-201ENST00000491870 277 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 AC096745.1-201ENST00000509945 370 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 AC104763.2-201ENST00000604179 382 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 AL034351.1-201ENST00000605288 668 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 U73479.1-201ENST00000618062 168 ntBASIC5.35□□□□□ -1.55
CNTN3Q9P232 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNTN3Q9P232 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNTN3Q9P232 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CNTN3Q9P232 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CNTN3Q9P232 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.34□□□□□ -1.55
CNTN3Q9P232 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CNTN3Q9P232 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.34□□□□□ -1.55
CNTN3Q9P232 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.34□□□□□ -1.55
CNTN3Q9P232 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
CNTN3Q9P232 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CNTN3Q9P232 Y_RNA.389-201ENST00000383924 113 ntBASIC5.34□□□□□ -1.55
CNTN3Q9P232 RNU6-356P-201ENST00000384140 107 ntBASIC5.34□□□□□ -1.55
CNTN3Q9P232 RNU6-95P-201ENST00000384697 107 ntBASIC5.34□□□□□ -1.55
CNTN3Q9P232 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms