Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC010627.1-201ENST00000503819 1294 ntBASIC2.15□□□□□ -2.07
PHRF1Q9P1Y6 RNU2-58P-201ENST00000516403 183 ntBASIC2.15□□□□□ -2.07
PHRF1Q9P1Y6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.15□□□□□ -2.07
PHRF1Q9P1Y6 MIR4458-201ENST00000578872 75 ntBASIC2.15□□□□□ -2.07
PHRF1Q9P1Y6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
PHRF1Q9P1Y6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
PHRF1Q9P1Y6 HSPE1P11-201ENST00000339579 310 ntBASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 RNA5SP393-201ENST00000363423 117 ntBASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 RNA5SP325-201ENST00000363756 130 ntBASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 RNU6-60P-201ENST00000364792 103 ntBASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 RNU4-52P-201ENST00000384209 138 ntBASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 AC114973.1-201ENST00000429057 632 ntBASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 RPS15AP36-201ENST00000492022 382 ntBASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 AC007115.1-201ENST00000546853 234 ntBASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 AL163153.1-201ENST00000554223 283 ntBASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 AC010735.1-201ENST00000567305 1026 ntBASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 AC006270.2-201ENST00000578523 652 ntBASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 MIR3935-201ENST00000583472 104 ntBASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
PHRF1Q9P1Y6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 MIR96-201ENST00000362288 78 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 RNU6-673P-201ENST00000365084 104 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 SNORD114-22-201ENST00000365423 72 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 RNU1-109P-201ENST00000383960 147 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 AC135721.1-201ENST00000497954 479 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 RPL37P25-201ENST00000507308 276 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 AC239860.2-201ENST00000525886 270 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 MIR3618-201ENST00000580330 88 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 APOOP1-201ENST00000604695 592 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 AL355816.1-201ENST00000607951 118 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 RNA5SP489-201ENST00000410986 109 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 XKRYP4-201ENST00000414395 483 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 PSMA2P3-201ENST00000429685 675 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 XKRYP5-201ENST00000449659 483 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 LARP7P4-201ENST00000481075 878 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 AC022709.1-201ENST00000615967 87 ntBASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PHRF1Q9P1Y6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 SNORA7.1-201ENST00000363750 139 ntBASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 RPS3AP9-201ENST00000417027 792 ntBASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 MTCYBP7-201ENST00000419540 1134 ntBASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 MTCO1P43-201ENST00000431831 488 ntBASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 AC244505.5-201ENST00000443639 207 ntBASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 RN7SKP234-201ENST00000517173 224 ntBASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 PSMA3P-201ENST00000555485 635 ntBASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 OR4K8P-201ENST00000578842 1048 ntBASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 VN1R84P-201ENST00000593697 235 ntBASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 AC018754.1-201ENST00000607486 925 ntBASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 PVT1_3.1-201ENST00000620853 95 ntBASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.12□□□□□ -2.07
PHRF1Q9P1Y6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PHRF1Q9P1Y6 SUMO1P4-201ENST00000429430 302 ntBASIC2.11□□□□□ -2.07
PHRF1Q9P1Y6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.11□□□□□ -2.07
PHRF1Q9P1Y6 AC104308.1-201ENST00000454621 333 ntBASIC2.11□□□□□ -2.07
PHRF1Q9P1Y6 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.11□□□□□ -2.07
PHRF1Q9P1Y6 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.11□□□□□ -2.07
PHRF1Q9P1Y6 SNX5P1-201ENST00000505757 1041 ntBASIC2.11□□□□□ -2.07
PHRF1Q9P1Y6 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.11□□□□□ -2.07
PHRF1Q9P1Y6 SNORD53B-201ENST00000577887 78 ntBASIC2.11□□□□□ -2.07
PHRF1Q9P1Y6 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.11□□□□□ -2.07
PHRF1Q9P1Y6 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PHRF1Q9P1Y6 RNU1-42P-201ENST00000364033 160 ntBASIC2.1□□□□□ -2.07
PHRF1Q9P1Y6 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.1□□□□□ -2.07
PHRF1Q9P1Y6 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.1□□□□□ -2.07
PHRF1Q9P1Y6 Z99714.1-201ENST00000450463 807 ntBASIC2.1□□□□□ -2.07
PHRF1Q9P1Y6 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.1□□□□□ -2.07
PHRF1Q9P1Y6 ATP5EP1-201ENST00000510257 156 ntBASIC2.1□□□□□ -2.07
PHRF1Q9P1Y6 RNU4-18P-201ENST00000516751 149 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms