Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC110774.1-201ENST00000623567 2018 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 Y_RNA.201-201ENST00000364052 96 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 Y_RNA.548-201ENST00000384656 105 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 MIR134-201ENST00000385258 73 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 SAR1AP2-201ENST00000392696 594 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 RNU6-628P-201ENST00000410675 107 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 CRYBB2P1-203ENST00000415709 538 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 EI24P1-201ENST00000416584 867 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 DBIP2-201ENST00000419076 262 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AL389915.1-201ENST00000422463 466 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 MTCO2P5-201ENST00000422621 426 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 RPS27AP14-201ENST00000422868 454 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 DLGAP5P1-201ENST00000430307 464 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 MUPP-201ENST00000438111 566 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 BMI1P1-201ENST00000445879 941 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AL359073.1-201ENST00000448036 403 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AP000542.1-201ENST00000448473 371 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AP001992.1-205ENST00000462248 379 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 RPS4XP10-201ENST00000465034 731 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AC116337.2-201ENST00000477662 156 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 RN7SL132P-201ENST00000478131 296 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 RN7SKP43-201ENST00000516173 320 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 SNORA70.18-201ENST00000516696 98 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AC025881.1-201ENST00000518851 512 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 CENPUP2-201ENST00000555897 1186 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AC091489.2-201ENST00000566263 604 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AC006362.1-201ENST00000567392 174 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AC053481.3-201ENST00000577881 843 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AL669831.4-202ENST00000590817 238 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AP000403.1-201ENST00000603349 851 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 PRELID3BP8-201ENST00000604148 295 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AC128687.1-201ENST00000605304 619 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AC012360.2-201ENST00000609349 391 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AL357080.1-201ENST00000617394 239 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AC091925.2-201ENST00000625059 256 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AC090582.1-201ENST00000636321 199 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC010733.2-201ENST00000589496 5702 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC092104.1-201ENST00000497346 1441 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC097714.1-201ENST00000511272 1647 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 RNU4-24P-201ENST00000364565 139 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 SNORA51.2-201ENST00000364595 132 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 RNU4-75P-201ENST00000364621 146 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 RNU6-809P-201ENST00000384461 107 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 Y_RNA.553-201ENST00000384670 102 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AL354719.1-201ENST00000406535 843 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 RNA5SP56-201ENST00000410277 118 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 GOT2P5-201ENST00000433995 546 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 SDCBPP1-201ENST00000440192 890 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 COX6CP2-201ENST00000444980 225 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 MTCO2P7-201ENST00000446518 666 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 RPL7P52-201ENST00000449200 742 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 HMGB1P15-201ENST00000453854 435 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 SUMO2P2-201ENST00000456482 255 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 SNORA84-201ENST00000459229 133 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AP000797.1-201ENST00000478870 387 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC106872.3-201ENST00000495104 446 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AP002748.2-201ENST00000528671 348 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC107954.1-201ENST00000565906 727 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms