Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 AL159987.1-201ENST00000347911 293 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 MIR375-201ENST00000362103 64 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 Y_RNA.48-201ENST00000362710 103 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 MIR130A-201ENST00000385274 89 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 SNORA69.1-201ENST00000390904 137 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 RNU6-754P-201ENST00000391166 107 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 RPS29P13-201ENST00000402041 169 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 RN7SKP216-201ENST00000411050 312 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 AL513124.1-201ENST00000450410 614 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 FABP5P13-201ENST00000452144 328 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 AC091180.1-201ENST00000462104 372 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 COX6CP14-201ENST00000469580 174 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 AC109925.1-201ENST00000478069 331 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 AC009120.1-201ENST00000493458 473 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 DUTP1-201ENST00000493631 470 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 NDUFB5P1-201ENST00000508134 564 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 AC074198.2-201ENST00000508153 258 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 BX510359.5-201ENST00000515651 304 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 RPL21P7-201ENST00000557463 483 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 MIR1244-1-201ENST00000612829 85 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 MIR1244-3-201ENST00000635744 85 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 MIR1244-2-201ENST00000636449 85 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 MIR1244-4-202ENST00000636813 85 ntBASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
CUEDC1Q9NWM3 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 AC138393.1-203ENST00000327086 343 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 RNU6-22P-201ENST00000384355 107 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 RN7SKP159-201ENST00000410657 292 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 AC007098.1-201ENST00000420122 367 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 HMGB3P24-201ENST00000433260 622 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 RPL21P104-201ENST00000464143 478 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 AC091021.1-201ENST00000468051 388 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 RPS17P15-201ENST00000475609 349 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 MRPL42P6-201ENST00000486397 371 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 AC004453.1-201ENST00000487895 408 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 SEPT14P8-201ENST00000508026 178 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 OR51K1P-201ENST00000510214 950 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 AF186190.1-201ENST00000517470 480 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 FTH1P11-201ENST00000517577 551 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 MIR4260-201ENST00000583107 67 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 SNHG22-203ENST00000617833 660 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 AL589994.2-201ENST00000621124 579 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 OR9K1P-202ENST00000641111 3217 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 AC239868.2-201ENST00000564237 4527 ntBASIC5.53□□□□□ -1.52
CUEDC1Q9NWM3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 AL136964.1-201ENST00000622038 2990 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 EOGT-210ENST00000615922 1931 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms