Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC021382.1-201ENST00000483523 359 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 HMGB1P36-201ENST00000487709 576 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 MTCYBP43-201ENST00000513621 740 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 OR7K1P-201ENST00000546439 926 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 TRAV37-201ENST00000553906 342 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 AP005205.1-201ENST00000563503 508 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 UBL5P2-201ENST00000583788 219 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 AC026422.1-201ENST00000623961 452 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 AC019226.2-201ENST00000625973 424 ntBASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.02□□□□□ -1.77
SMC4Q9NTJ3 MTND5P27-201ENST00000428871 1720 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 RPL21P132-201ENST00000331267 462 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 RNU6-525P-201ENST00000363685 104 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 RNU6-723P-201ENST00000383973 107 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 SNORA7.4-201ENST00000384249 137 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 Y_RNA.548-201ENST00000384656 105 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 MIR591-201ENST00000385290 95 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 SNORA48.8-201ENST00000391324 134 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AF228730.1-201ENST00000397972 663 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 RNU4-47P-201ENST00000410876 114 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AL353678.1-201ENST00000422735 741 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 RPL7P34-201ENST00000433316 712 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AL354941.1-201ENST00000438600 464 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AL008629.1-201ENST00000438615 184 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 RABEPKP1-201ENST00000440529 1026 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AC234775.1-201ENST00000454247 670 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AP001025.2-201ENST00000490908 477 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AC068587.4-201ENST00000533893 186 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AC012468.1-201ENST00000604888 430 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AC072039.2-201ENST00000608883 439 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AC018692.3-201ENST00000623929 123 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 AC009039.2-201ENST00000624524 529 ntBASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SMC4Q9NTJ3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SMC4Q9NTJ3 MTCO1P9-201ENST00000505577 1534 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4□□□□□ -1.77
SMC4Q9NTJ3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 U3.11-201ENST00000364476 212 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 RPS3AP24-201ENST00000407896 734 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 MIR320C1-201ENST00000408566 88 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4□□□□□ -1.77
SMC4Q9NTJ3 RPL27AP8-201ENST00000424277 446 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 AC024082.2-201ENST00000434771 238 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 RPL23AP22-201ENST00000437556 453 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 RSU1P2-202ENST00000437884 485 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 RPS12P18-201ENST00000442381 270 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 RPS3AP12-201ENST00000443616 753 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4□□□□□ -1.77
SMC4Q9NTJ3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4□□□□□ -1.77
SMC4Q9NTJ3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4□□□□□ -1.77
SMC4Q9NTJ3 RPS27P29-201ENST00000463110 252 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 AC034222.1-201ENST00000494052 532 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 VN1R104P-201ENST00000505115 1009 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 AC022447.3-201ENST00000506865 495 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4□□□□□ -1.77
SMC4Q9NTJ3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4□□□□□ -1.77
SMC4Q9NTJ3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4□□□□□ -1.77
SMC4Q9NTJ3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4□□□□□ -1.77
SMC4Q9NTJ3 ISCA1P3-201ENST00000577104 373 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4□□□□□ -1.77
SMC4Q9NTJ3 AC021171.1-201ENST00000603137 706 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SMC4Q9NTJ3 AL607023.1-201ENST00000620045 248 ntBASIC4□□□□□ -1.77
SMC4Q9NTJ3 MIR4275-201ENST00000636486 87 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms