Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 DEFB109C-201ENST00000382575 264 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 DEFB109B-201ENST00000382656 264 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 RNU6-213P-201ENST00000384051 104 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 MTHFD2P2-201ENST00000407725 247 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 RN7SKP27-201ENST00000410684 333 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 RNU2-62P-201ENST00000410868 191 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 RPL30P2-201ENST00000414021 291 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AC019097.1-201ENST00000424783 735 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AC009961.2-201ENST00000435771 251 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AC093156.1-201ENST00000440382 670 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AC005094.1-201ENST00000440420 368 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 MTCO3P45-201ENST00000443036 613 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 GAPDHP17-201ENST00000449858 1001 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 TPTE2P5-203ENST00000458118 728 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 HSPE1P6-201ENST00000479457 291 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 SNORA18.6-201ENST00000516792 115 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 RNU2-46P-201ENST00000517038 113 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 MIR3921-201ENST00000577308 85 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 MIR4528-201ENST00000577763 90 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 MIR4738-201ENST00000579134 87 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 KLKP1-201ENST00000595979 403 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 DUXAP4-201ENST00000603046 613 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AC008277.2-201ENST00000605196 797 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AL451064.1-201ENST00000607718 471 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AC006566.1-201ENST00000608943 513 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 HULC.1-201ENST00000612720 240 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AC112484.5-201ENST00000624189 228 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AP001148.1-201ENST00000624124 2359 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 RNY4P34-201ENST00000364779 95 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 RNA5SP97-201ENST00000365006 84 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 RNY3P13-201ENST00000365542 102 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 OR5H15-201ENST00000383696 930 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 SNORA36C-201ENST00000384289 132 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 RPL23AP32-201ENST00000395315 459 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 Z98941.1-201ENST00000407764 100 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 RN7SKP159-201ENST00000410657 292 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 RHEBP3-201ENST00000411920 351 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC009237.5-201ENST00000414271 501 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC073614.1-201ENST00000438690 650 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 RABEPKP1-201ENST00000440529 1026 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 HMGN2P16-201ENST00000456802 261 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC008481.1-201ENST00000463278 396 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 RPS7P7-201ENST00000463499 571 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 KLF3P2-201ENST00000465138 268 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 MTCO2P29-201ENST00000465212 189 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC082651.2-201ENST00000496833 166 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 RNU6-64P-201ENST00000517119 105 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC100870.1-201ENST00000522035 505 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC074050.1-201ENST00000563247 211 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 MIR5047-201ENST00000579212 100 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 NRBF2P1-201ENST00000587407 859 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC087683.1-201ENST00000591187 441 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC103591.3-201ENST00000608684 209 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC104073.3-201ENST00000610942 955 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 SDAD1P2-201ENST00000441308 2028 ntBASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC6A13Q9NSD5 AL672296.1-201ENST00000427780 2158 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms