Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC024224.1-201ENST00000538284 609 ntBASIC3.36□□□□□ -1.87
SIX2Q9NPC8 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX2Q9NPC8 OR6C73P-201ENST00000546432 358 ntBASIC3.36□□□□□ -1.87
SIX2Q9NPC8 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX2Q9NPC8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.36□□□□□ -1.87
SIX2Q9NPC8 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.36□□□□□ -1.87
SIX2Q9NPC8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX2Q9NPC8 AC087683.1-201ENST00000591187 441 ntBASIC3.36□□□□□ -1.87
SIX2Q9NPC8 MIR7112-201ENST00000616126 65 ntBASIC3.36□□□□□ -1.87
SIX2Q9NPC8 AC138932.5-201ENST00000617759 563 ntBASIC3.36□□□□□ -1.87
SIX2Q9NPC8 AC092628.2-201ENST00000622492 339 ntBASIC3.36□□□□□ -1.87
SIX2Q9NPC8 AC084035.1-201ENST00000634543 607 ntBASIC3.36□□□□□ -1.87
SIX2Q9NPC8 CRYM-AS1-204ENST00000637983 556 ntBASIC3.36□□□□□ -1.87
SIX2Q9NPC8 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
SIX2Q9NPC8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SIX2Q9NPC8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 Z73965.1-201ENST00000623412 2297 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 MIR153-1-201ENST00000384914 90 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AC110754.1-201ENST00000399740 601 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AL356583.2-201ENST00000426536 280 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AC092017.2-201ENST00000427600 362 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 FTH1P1-201ENST00000437933 532 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 RPL7P36-201ENST00000444633 681 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 NDUFS5P3-201ENST00000450668 321 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 SNRPFP4-201ENST00000456366 242 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 RN7SL863P-201ENST00000462370 296 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 RN7SL20P-201ENST00000488827 297 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AP001025.2-201ENST00000490908 477 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AC110794.1-201ENST00000505816 425 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AF131216.2-201ENST00000512316 564 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AC108043.1-201ENST00000512696 574 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AC093677.1-201ENST00000514414 678 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 OR8L1P-201ENST00000534005 955 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AC005771.1-201ENST00000585581 349 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AL606834.2-201ENST00000602954 668 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AC079089.3-201ENST00000603094 673 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AC010680.4-201ENST00000605334 543 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AC104010.1-201ENST00000616889 150 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AC018692.3-201ENST00000623929 123 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SIX2Q9NPC8 TEX21P-201ENST00000447107 1476 ntBASIC3.35□□□□□ -1.87
SIX2Q9NPC8 AL049780.3-201ENST00000624612 1583 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SIX2Q9NPC8 AL161781.1-201ENST00000354277 403 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.34□□□□□ -1.87
SIX2Q9NPC8 RNU6-809P-201ENST00000384461 107 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 RNU2-15P-201ENST00000410692 191 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 HMGN1P14-201ENST00000412459 517 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.34□□□□□ -1.87
SIX2Q9NPC8 AC005517.2-201ENST00000424673 553 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.34□□□□□ -1.87
SIX2Q9NPC8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.34□□□□□ -1.87
SIX2Q9NPC8 USP9YP14-201ENST00000430663 563 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 EZH2P1-201ENST00000431167 291 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.34□□□□□ -1.87
SIX2Q9NPC8 AC091862.1-201ENST00000438016 1100 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.34□□□□□ -1.87
SIX2Q9NPC8 RPL29P29-201ENST00000448725 423 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.34□□□□□ -1.87
SIX2Q9NPC8 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.34□□□□□ -1.87
SIX2Q9NPC8 HMGB1P15-201ENST00000453854 435 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 RPS20P24-201ENST00000457473 361 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.34□□□□□ -1.87
SIX2Q9NPC8 TPT1P7-201ENST00000458300 517 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 AC109925.1-201ENST00000478069 331 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.34□□□□□ -1.87
SIX2Q9NPC8 AC023424.2-201ENST00000493479 777 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 PRELID3BP7-201ENST00000503606 469 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 DUXAP2-201ENST00000519198 589 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.34□□□□□ -1.87
SIX2Q9NPC8 MTND4LP18-201ENST00000526864 291 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.34□□□□□ -1.87
SIX2Q9NPC8 AC022880.1-201ENST00000534017 973 ntBASIC3.34□□□□□ -1.87
SIX2Q9NPC8 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms