Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 MIR490-201ENST00000384865 128 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AC018630.2-202ENST00000422992 927 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 HMGN2P38-201ENST00000423806 265 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AL358075.3-201ENST00000426289 226 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AL356867.1-201ENST00000429623 299 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 OR4K11P-201ENST00000431829 904 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AC098826.1-201ENST00000433943 471 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 CYCSP32-201ENST00000440548 321 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 BMI1P1-201ENST00000445879 941 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AC026410.2-201ENST00000460281 156 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 RPS15AP17-201ENST00000470598 390 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AC107626.1-201ENST00000471084 183 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 SUMO2P6-201ENST00000505273 288 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AC113155.1-201ENST00000511141 769 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AC008885.1-201ENST00000514930 301 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AC026403.1-201ENST00000518938 295 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AP002748.2-201ENST00000528671 348 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AP000889.2-201ENST00000532684 490 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 TRAV28-201ENST00000557548 323 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AC138915.2-201ENST00000569776 97 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 MIR5680-201ENST00000577577 84 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 NRBF2P5-201ENST00000603087 788 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AC004067.1-201ENST00000608733 700 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AC103710.4-201ENST00000609301 899 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 AC084824.4-201ENST00000620106 731 ntBASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VCX3AQ9NNX9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 SNORD114-30-201ENST00000364448 72 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 RNU6-207P-201ENST00000384137 107 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 SNORA36C-201ENST00000384289 132 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 SNORA48.5-201ENST00000391143 135 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 USP9YP20-201ENST00000419224 558 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 MTCO2P1-201ENST00000424648 477 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 ATP5F1P1-201ENST00000433775 569 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 RPL39P6-201ENST00000448289 150 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC090515.1-201ENST00000465295 476 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC108734.3-201ENST00000481241 1165 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC002456.2-201ENST00000509356 380 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 SCARNA15.2-201ENST00000516409 127 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC025755.1-201ENST00000521306 278 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 PSMA2P1-201ENST00000526365 646 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 COX6CP5-201ENST00000527162 228 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC125611.1-201ENST00000549563 229 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC124947.2-202ENST00000552735 133 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AP001429.1-201ENST00000602568 530 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC068313.1-201ENST00000604028 1008 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AP005229.2-201ENST00000609980 697 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AP003399.1-201ENST00000637534 361 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 CRYM-AS1-204ENST00000637983 556 ntBASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.31□□□□□ -2.04
VCX3AQ9NNX9 AC007785.2-201ENST00000598627 1916 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 RNU1-51P-201ENST00000365345 176 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 RNU6-609P-201ENST00000365459 107 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 Y_RNA.548-201ENST00000384656 105 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 AL450338.1-201ENST00000407987 512 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 RAB9AP3-201ENST00000412737 573 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 COTL1P1-201ENST00000422309 375 ntBASIC2.3□□□□□ -2.04
VCX3AQ9NNX9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms