Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC093331.1-201ENST00000521474 169 ntBASIC1.5□□□□□ -2.17
CHD8Q9HCK8 AC103810.1-201ENST00000579873 453 ntBASIC1.5□□□□□ -2.17
CHD8Q9HCK8 AL592437.2-201ENST00000421655 2434 ntBASIC1.49□□□□□ -2.17
CHD8Q9HCK8 Y_RNA.324-201ENST00000365165 102 ntBASIC1.49□□□□□ -2.17
CHD8Q9HCK8 SSXP10-201ENST00000402595 565 ntBASIC1.49□□□□□ -2.17
CHD8Q9HCK8 ZNF965P-201ENST00000432501 817 ntBASIC1.49□□□□□ -2.17
CHD8Q9HCK8 USP9YP10-201ENST00000454868 628 ntBASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.49□□□□□ -2.17
CHD8Q9HCK8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CHD8Q9HCK8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AC116447.1-201ENST00000613153 453 ntBASIC1.49□□□□□ -2.17
CHD8Q9HCK8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
CHD8Q9HCK8 XIST-201ENST00000416330 750 ntTSL 2 BASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AC093084.1-201ENST00000424233 687 ntBASIC1.49□□□□□ -2.17
CHD8Q9HCK8 CBX3P6-201ENST00000430257 527 ntBASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AC109486.1-201ENST00000486833 374 ntBASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AL845331.3-202ENST00000562856 261 ntBASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AC124283.4-201ENST00000581815 456 ntBASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AC083806.3-201ENST00000614016 455 ntBASIC1.49□□□□□ -2.17
CHD8Q9HCK8 AL449363.1-201ENST00000617815 186 ntBASIC1.49□□□□□ -2.17
CHD8Q9HCK8 FO624990.1-201ENST00000636373 85 ntBASIC1.49□□□□□ -2.17
CHD8Q9HCK8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 AC095050.2-201ENST00000510748 1458 ntBASIC1.48□□□□□ -2.17
CHD8Q9HCK8 RPL23AP29-201ENST00000397284 453 ntBASIC1.48□□□□□ -2.17
CHD8Q9HCK8 BTBD10P2-201ENST00000404779 676 ntBASIC1.48□□□□□ -2.17
CHD8Q9HCK8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 TATDN1P1-201ENST00000414123 891 ntBASIC1.48□□□□□ -2.17
CHD8Q9HCK8 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 Z99497.1-201ENST00000421282 135 ntBASIC1.48□□□□□ -2.17
CHD8Q9HCK8 AL513185.2-201ENST00000425543 193 ntBASIC1.48□□□□□ -2.17
CHD8Q9HCK8 AL645568.3-201ENST00000433683 316 ntBASIC1.48□□□□□ -2.17
CHD8Q9HCK8 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 AC025033.1-201ENST00000463883 194 ntBASIC1.48□□□□□ -2.17
CHD8Q9HCK8 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 AC074029.2-201ENST00000551045 634 ntBASIC1.48□□□□□ -2.17
CHD8Q9HCK8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 SNORD114-27-201ENST00000363766 70 ntBASIC1.48□□□□□ -2.17
CHD8Q9HCK8 RNU2-22P-201ENST00000411266 212 ntBASIC1.48□□□□□ -2.17
CHD8Q9HCK8 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 snoU13.19-201ENST00000459148 104 ntBASIC1.48□□□□□ -2.17
CHD8Q9HCK8 AC104472.2-201ENST00000469035 601 ntBASIC1.48□□□□□ -2.17
CHD8Q9HCK8 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 AC090525.3-201ENST00000605601 189 ntBASIC1.48□□□□□ -2.17
CHD8Q9HCK8 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.48□□□□□ -2.17
CHD8Q9HCK8 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CHD8Q9HCK8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.47□□□□□ -2.17
CHD8Q9HCK8 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.47□□□□□ -2.17
CHD8Q9HCK8 RNU6-72P-201ENST00000384285 79 ntBASIC1.47□□□□□ -2.17
CHD8Q9HCK8 MIR222-201ENST00000384992 110 ntBASIC1.47□□□□□ -2.17
CHD8Q9HCK8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.47□□□□□ -2.17
CHD8Q9HCK8 SAR1AP4-201ENST00000429225 591 ntBASIC1.47□□□□□ -2.17
CHD8Q9HCK8 HIGD1AP11-201ENST00000438361 280 ntBASIC1.47□□□□□ -2.17
CHD8Q9HCK8 AL078601.1-201ENST00000444542 271 ntBASIC1.47□□□□□ -2.17
CHD8Q9HCK8 USP9YP5-201ENST00000511770 630 ntBASIC1.47□□□□□ -2.17
CHD8Q9HCK8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CHD8Q9HCK8 AL592494.3-201ENST00000609485 464 ntBASIC1.47□□□□□ -2.17
CHD8Q9HCK8 OR5AQ1P-203ENST00000641818 1529 ntBASIC1.47□□□□□ -2.17
CHD8Q9HCK8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CHD8Q9HCK8 RNA5SP160-201ENST00000364866 120 ntBASIC1.47□□□□□ -2.17
CHD8Q9HCK8 AL512504.1-201ENST00000415494 778 ntBASIC1.47□□□□□ -2.17
CHD8Q9HCK8 AC073310.1-201ENST00000423226 1033 ntBASIC1.47□□□□□ -2.17
CHD8Q9HCK8 TPT1P14-201ENST00000448018 505 ntBASIC1.47□□□□□ -2.17
CHD8Q9HCK8 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.47□□□□□ -2.17
CHD8Q9HCK8 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
CHD8Q9HCK8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CHD8Q9HCK8 OR5AQ1P-202ENST00000641257 1534 ntBASIC1.46□□□□□ -2.18
CHD8Q9HCK8 MIR6073-201ENST00000352083 89 ntBASIC1.46□□□□□ -2.18
CHD8Q9HCK8 RN7SKP101-201ENST00000411376 320 ntBASIC1.46□□□□□ -2.18
CHD8Q9HCK8 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.46□□□□□ -2.18
CHD8Q9HCK8 NEFMP1-201ENST00000443423 1006 ntBASIC1.46□□□□□ -2.18
CHD8Q9HCK8 COX6CP12-201ENST00000446748 202 ntBASIC1.46□□□□□ -2.18
CHD8Q9HCK8 AC087241.2-201ENST00000535801 324 ntBASIC1.46□□□□□ -2.18
CHD8Q9HCK8 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.46□□□□□ -2.18
CHD8Q9HCK8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.46□□□□□ -2.18
CHD8Q9HCK8 AC135776.4-201ENST00000624300 1904 ntBASIC1.46□□□□□ -2.18
CHD8Q9HCK8 SNORD6-201ENST00000365444 73 ntBASIC1.46□□□□□ -2.18
CHD8Q9HCK8 RPS12P24-201ENST00000412619 387 ntBASIC1.46□□□□□ -2.18
CHD8Q9HCK8 ARL5AP2-201ENST00000444698 533 ntBASIC1.46□□□□□ -2.18
CHD8Q9HCK8 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.46□□□□□ -2.18
CHD8Q9HCK8 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.46□□□□□ -2.18
CHD8Q9HCK8 SEPT7P9-203ENST00000604116 343 ntBASIC1.46□□□□□ -2.18
CHD8Q9HCK8 AC010297.1-201ENST00000623948 149 ntBASIC1.46□□□□□ -2.18
CHD8Q9HCK8 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms