Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 Z95327.1-201ENST00000446082 482 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AL591623.2-201ENST00000449978 222 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 USP9YP23-201ENST00000455085 407 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 SCARNA18-201ENST00000459004 134 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 RPL7AP28-201ENST00000464513 571 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC053481.1-201ENST00000467217 306 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 RBBP4P6-201ENST00000508098 202 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC108078.2-201ENST00000510750 236 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-976P-201ENST00000516086 111 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-27P-201ENST00000516146 107 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-764P-201ENST00000516396 105 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 IGLVIV-53-201ENST00000520107 367 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC135001.1-201ENST00000544546 283 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC133555.2-201ENST00000550213 292 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC093249.4-201ENST00000564755 259 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC023043.2-201ENST00000589678 1026 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC123786.2-201ENST00000603459 275 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AL355365.1-201ENST00000616480 294 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC092608.2-201ENST00000624427 218 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC091925.2-201ENST00000625059 256 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC055839.1-201ENST00000634467 498 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 TLK1P1-201ENST00000456760 2440 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 TPTE2P4-201ENST00000258589 1605 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-1115P-201ENST00000362490 106 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-82P-201ENST00000363970 107 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-1040P-201ENST00000383974 107 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-550P-201ENST00000391057 101 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 U3.29-201ENST00000391296 212 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 SOD2P1-201ENST00000396543 562 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 MIR450B-201ENST00000401182 78 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 U3.35-201ENST00000408405 208 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 RNA5SP146-201ENST00000410743 123 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-516P-201ENST00000411381 104 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AC114755.2-201ENST00000413520 361 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AL139095.3-201ENST00000419672 1203 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AL731563.1-201ENST00000442202 214 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 RPS17P13-201ENST00000448974 407 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AC116533.1-201ENST00000459748 321 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 TRBV1-201ENST00000476502 284 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 HMGB1P30-201ENST00000492455 606 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AC135721.1-201ENST00000497954 479 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-189P-201ENST00000516120 101 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 MIR4293-201ENST00000584305 78 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 BNIP3P16-201ENST00000589779 534 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AC012443.1-201ENST00000605605 231 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 FAM27B-201ENST00000610601 213 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AP001486.3-201ENST00000615334 372 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 uc_338.18-201ENST00000615451 175 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 AL732372.2-225ENST00000642124 456 ntBASIC4.24□□□□□ -1.73
SEC61A2Q9H9S3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms