Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AL034351.1-201ENST00000605288 668 ntBASIC3.92□□□□□ -1.78
EBF3Q9H4W6 U3.45-201ENST00000607547 219 ntBASIC3.92□□□□□ -1.78
EBF3Q9H4W6 AC103710.1-201ENST00000610003 901 ntBASIC3.92□□□□□ -1.78
EBF3Q9H4W6 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.92□□□□□ -1.78
EBF3Q9H4W6 AC015967.1-201ENST00000619893 476 ntBASIC3.92□□□□□ -1.78
EBF3Q9H4W6 U7.8-201ENST00000619968 63 ntBASIC3.92□□□□□ -1.78
EBF3Q9H4W6 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.92□□□□□ -1.78
EBF3Q9H4W6 AC244205.2-202ENST00000635781 342 ntBASIC3.92□□□□□ -1.78
EBF3Q9H4W6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.92□□□□□ -1.78
EBF3Q9H4W6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
EBF3Q9H4W6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 RNA5SP51-201ENST00000364750 119 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 Y_RNA.279-201ENST00000364763 95 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 RNU6-483P-201ENST00000384088 108 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 RNU6-441P-201ENST00000384545 106 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 MT-TD-201ENST00000387419 68 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 RPL7P60-201ENST00000397636 735 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 RPL31P1-201ENST00000398116 372 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 DSTNP4-201ENST00000399472 474 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 RNU6-195P-201ENST00000411352 109 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 AL133384.1-201ENST00000412744 351 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 HMGB3P20-201ENST00000417997 600 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 USP9YP36-201ENST00000424581 829 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 AL031736.2-201ENST00000426573 787 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 MTND6P13-201ENST00000443510 523 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 AC079448.1-201ENST00000449377 373 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 PMCHL2-203ENST00000457791 237 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 MEMO1P3-201ENST00000459811 302 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 RN7SKP18-201ENST00000516005 275 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 AL157687.1-201ENST00000554853 619 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 GNRHR2P1-201ENST00000555315 631 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 HSPE1P3-201ENST00000559254 309 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 MTCO3P13-201ENST00000577757 781 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 MIR4512-201ENST00000583257 77 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 NF1P5-201ENST00000588287 448 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 MIR1321-201ENST00000637766 79 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
EBF3Q9H4W6 MFSD8-236ENST00000641509 4050 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 AC006504.1-201ENST00000562493 3666 ntBASIC3.91□□□□□ -1.78
EBF3Q9H4W6 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
EBF3Q9H4W6 MTCO1P12-201ENST00000414273 1543 ntBASIC3.9□□□□□ -1.78
EBF3Q9H4W6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.9□□□□□ -1.78
EBF3Q9H4W6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
EBF3Q9H4W6 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 RNU6-777P-201ENST00000364265 104 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 Y_RNA.356-201ENST00000365475 113 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 MIR649-201ENST00000384843 97 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 RPL30P2-201ENST00000414021 291 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 USP9YP27-201ENST00000418455 438 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 USP9YP20-201ENST00000419224 558 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 TIMM9P3-201ENST00000428659 274 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 SNRPEP7-201ENST00000438350 220 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 RPL23AP16-201ENST00000441715 421 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 PRDX3P3-201ENST00000447765 522 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AL590365.1-201ENST00000450788 243 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 HMGB3P21-201ENST00000452483 547 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 OR6K1P-201ENST00000456766 971 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC022364.2-201ENST00000457963 554 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 RPS15AP17-201ENST00000470598 390 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 HMGB1P29-201ENST00000505659 499 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC117522.3-201ENST00000507974 584 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 MTND5P4-201ENST00000514978 288 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 RNU6-150P-201ENST00000516237 95 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AF235103.2-201ENST00000525753 346 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AP003122.4-201ENST00000530980 758 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC013828.2-201ENST00000532487 235 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AL391840.1-201ENST00000571144 367 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 RPS3AP23-202ENST00000574601 686 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms