Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 ASNSP3-201ENST00000451989 1306 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 RNU5E-8P-201ENST00000363502 116 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 RNU6-744P-201ENST00000365557 107 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 RNU6-1316P-201ENST00000384242 108 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 AL356421.1-201ENST00000403255 413 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 AL590004.2-201ENST00000404787 371 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 RPS3AP25-201ENST00000411660 793 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 SETP8-201ENST00000435341 628 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 MTND3P1-201ENST00000441336 220 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 AC093392.2-201ENST00000450682 337 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 AC034236.1-201ENST00000469891 373 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 AC109925.1-201ENST00000478069 331 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 RPS29P2-201ENST00000479278 136 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 RN7SL499P-201ENST00000481141 276 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 GMPSP1-201ENST00000514075 579 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 NCAPGP2-201ENST00000557911 754 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 ELOCP35-201ENST00000604289 336 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 AC090186.1-201ENST00000605991 572 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 AC097478.2-201ENST00000610572 514 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 MIR7975-201ENST00000619350 68 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 AC013470.4-201ENST00000619978 986 ntBASIC3.09□□□□□ -1.91
DDX47Q9H0S4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.09□□□□□ -1.91
DDX47Q9H0S4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.09□□□□□ -1.92
DDX47Q9H0S4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
DDX47Q9H0S4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.09□□□□□ -1.92
DDX47Q9H0S4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
DDX47Q9H0S4 AL161431.1-201ENST00000618966 4205 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 SNORA63.1-201ENST00000362493 131 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 RNU6-1078P-201ENST00000364522 103 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 SNORA36C-201ENST00000384289 132 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 MIR181A2-201ENST00000384863 110 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 MIR34B-201ENST00000385076 84 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC234781.2-201ENST00000426370 994 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC097713.2-201ENST00000430199 356 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 GSTA11P-201ENST00000452866 669 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 PRSS3P4-201ENST00000453323 162 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AL031183.1-201ENST00000457667 207 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AL049874.1-201ENST00000489560 388 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 RPL30P5-201ENST00000494923 336 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC111000.2-201ENST00000507775 550 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 RN7SKP282-201ENST00000516824 299 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 SNORA31.26-201ENST00000517250 137 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC034105.3-201ENST00000565294 442 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC068313.1-201ENST00000604028 1008 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AL158042.1-201ENST00000605338 460 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC112220.3-201ENST00000605502 502 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC069200.1-201ENST00000609511 323 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC107871.2-201ENST00000612894 502 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AL603758.1-201ENST00000618654 241 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AP000484.1-201ENST00000620067 1252 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AL078595.3-201ENST00000623815 1166 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC004777.1-201ENST00000624317 287 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC079228.1-201ENST00000624774 1049 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 MIR622-201ENST00000638396 96 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AP000526.1-201ENST00000603308 1388 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC092447.7-201ENST00000422212 1621 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
DDX47Q9H0S4 AC092447.10-201ENST00000620607 1652 ntBASIC3.08□□□□□ -1.92
DDX47Q9H0S4 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.07□□□□□ -1.92
DDX47Q9H0S4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
DDX47Q9H0S4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
DDX47Q9H0S4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms